Pairwise Alignments

Query, 460 a.a., DNA repair protein RadA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  329 bits (844), Expect = 1e-94
 Identities = 181/451 (40%), Positives = 262/451 (58%), Gaps = 11/451 (2%)

Query: 6   KRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGVAKVQK 65
           +  +VC  CGA  P+W+GQC AC  WNT+    L  +P   +     G +     ++ Q 
Sbjct: 4   RETYVCTACGARAPQWRGQCPACKEWNTL---ELTVAPREGKAGARPGASSVGAQSRAQP 60

Query: 66  LSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAQQMK- 124
           L D++      F +G    DRVLG G+VPG+AIL+GG PG GKSTLLLQ    +A   + 
Sbjct: 61  LKDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGRG 120

Query: 125 TLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAE-EEQPKLMVIDSIQVMH 183
            LY++GEESL Q+  RA RLG+  D L  ++ T ++ +    E  E P L+++DS+Q + 
Sbjct: 121 VLYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQTVS 180

Query: 184 MADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVLL 243
               +  PG+V+QVR  +  +    K  G  +++VGHVTKDG+LAGP++LEH +D  + +
Sbjct: 181 SDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVISI 240

Query: 244 DGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSVMVV 303
           +GD    FR LR  KNRFG   EL VF M EQG+  V +PS  FL   D   SG+++++ 
Sbjct: 241 EGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALVMA 300

Query: 304 WEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFVNVV 363
            +G RPL VE+QALV  S +A PRR  +G + NRL +LLAVL +   L     D++  + 
Sbjct: 301 VDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKIG 360

Query: 364 GGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHG 423
           GG+K+ +   DL L+ A++SS  D PLP+  V +GEV L G++RPV +   R  +A + G
Sbjct: 361 GGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARRLG 420

Query: 424 FRRAIVPAANVPKKAPEGMQIFGVKKLSDAL 454
           +   + PA +  +  P       V  L DAL
Sbjct: 421 YTPILHPADDAARGVPT------VAALQDAL 445