Pairwise Alignments

Query, 252 a.a., Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 253 a.a., undecaprenyl diphosphate synthase from Pseudomonas stutzeri RCH2

 Score =  245 bits (625), Expect = 7e-70
 Identities = 121/228 (53%), Positives = 154/228 (67%)

Query: 18  RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 77
           RHVAIIMDGN RWAK++      GHKAG  +VR  +   A++G+E LTL+AFSSENW RP
Sbjct: 14  RHVAIIMDGNNRWAKRRLLPGVAGHKAGVDAVRAVIEVCADSGVEVLTLFAFSSENWQRP 73

Query: 78  AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLT 137
           A EV ALMELF+ AL  E + L  + +RLRIIGD +RF+  LQ  + + E +TAGN    
Sbjct: 74  ADEVGALMELFLSALRREARKLDENGIRLRIIGDRARFHPELQAAMLEVEEITAGNHRFV 133

Query: 138 LNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGE 197
           L +AANYGG+WDI+Q  + LA + Q G L P +I   +   ++   ++   DL IRTGGE
Sbjct: 134 LQVAANYGGQWDILQAAQHLATEAQAGRLNPAEITPALFQSYLATGDMPLPDLCIRTGGE 193

Query: 198 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGT 245
            RISNFLLWQ+AYAELYF+D+ WPDF       AL  F+ R+RRFG T
Sbjct: 194 RRISNFLLWQLAYAELYFSDLYWPDFKHVAMRKALADFSTRQRRFGKT 241