Pairwise Alignments

Query, 211 a.a., Chemotaxis protein LafU from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 393 a.a., Flagellar motor rotation protein MotB from Xanthomonas campestris pv. campestris strain 8004

 Score =  111 bits (277), Expect = 2e-29
 Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 9/177 (5%)

Query: 2   AVPEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLRVL 61
           A   + + +A+D     AL++        +L  +I         +  L +++ P GLR+ 
Sbjct: 113 AADTDVDSRAKDKKRLEALMQ--------DLKEAIDKSQALEPFKDQLLLDLTPDGLRIQ 164

Query: 62  IKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNI-YNNWN 120
           I D QNR MF+ G  Q+ P+   +L EL+   + + N I ITGHTD  AY ++  Y NW 
Sbjct: 165 IVDKQNRPMFDIGRDQLKPYTVDILRELSSFINQVPNHISITGHTDTTAYSSDAGYTNWE 224

Query: 121 LSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTKSA 177
           LS DRA +ARR L   GM + KV +V  ++  +L D  NPQ+  NRRI I+V+T+ A
Sbjct: 225 LSADRANAARRALVGGGMADAKVTRVVGLSSSVLFDKTNPQNPINRRISIVVMTQDA 281