Pairwise Alignments

Query, 623 a.a., Peptidyl-prolyl cis-trans isomerase D from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 618 a.a., Parvulin-like peptidyl-prolyl isomerase from Pseudomonas stutzeri RCH2

 Score =  255 bits (651), Expect = 5e-72
 Identities = 186/630 (29%), Positives = 311/630 (49%), Gaps = 29/630 (4%)

Query: 1   MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY-AAKVNDQKISRGQFENAF 59
           M+ ++R  +   + K I GII+V   LTG         N+  AA VN ++ISR   + A 
Sbjct: 1   MLQNIRDNSQGWIAKTIIGIIVVLLALTGFEAIFNASSNSQNAAAVNGEEISRYDLDQAM 60

Query: 60  NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119
           N +R ++ QQLG  +     ++   + LR   L  LID  LL Q A+      S E + Q
Sbjct: 61  NMQRRQLAQQLGQDFDASLIDD---RLLRDAALGSLIDRMLLLQGAKSADFAFSREALDQ 117

Query: 120 AIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179
            I  TP FQV+G F ++R++ ++ QMG +  Q+ Q L  ++   QL  G++GT F+   +
Sbjct: 118 LILQTPEFQVEGAFSSARFDQVIQQMGYSRLQFRQLLEQEMLIGQLRAGISGTGFVTDQQ 177

Query: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLD 239
            +  A L  Q R    A   V A      V++++I  YY+ N + F+TPEQ  V Y++L 
Sbjct: 178 VENFARLEMQTRDF--ALFTVPAQHETIDVSDEQIQKYYDDNADRFLTPEQVIVEYVELK 235

Query: 240 AATM--QQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT---KTEDEAKAVLDELN---K 291
             +   Q   SD ++Q  Y +      + +R  + +I+T    ++ EAKA +DE+    K
Sbjct: 236 KESFFDQVEASDEELQELYQKQIANLAEQRRAAHILIETGGELSDAEAKAKIDEIAERVK 295

Query: 292 GG-DFAALAKEKSADIISARNGGDMGWLEDATIPDELKNA-GLKEKGQLSGVIKSSVGFL 349
           GG DFA +AKE S D  SA  GGD+G+          ++A      G++S  ++S  G+ 
Sbjct: 296 GGEDFAVVAKEVSQDPGSANEGGDLGFAGPGVYDPAFEDALYALNYGEVSAPVQSEFGWH 355

Query: 350 IVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAA 409
           I++L  +Q  +V S + ++ ++  ++K ++    +    +++ DAA  +   L    Q  
Sbjct: 356 IIKLLGVQSPEVPSFESMKPELVRELKAQQVEQRFVETSKQLEDAAF-EASDLTQPAQDL 414

Query: 410 GVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRIS 469
           G+    T  F +D        + V  A F+  ++      G NS +I +D D +  LR+ 
Sbjct: 415 GLMVQTTEAFGRDGGEGITANRQVIQAAFSEEVL----VDGANSSVIELDPDTSIALRVK 470

Query: 470 EHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEP 529
           EH   A  PLADV++ +   +Q + A + A+   E+LL DL+ G+  +    +     E 
Sbjct: 471 EHLKPAPIPLADVRDDIVQQLQRSLAAETARTQGEQLLADLRQGQQPDGQWQS----VEA 526

Query: 530 KTLSRSGRDP-ISQAAFALPLP-AKDKPSYGMATDMQGNVVLLALDEVK--QGSMPEDQK 585
            T S+ G  P + QA F +P P  +DKP+Y       G+ V++ L+ V   + ++ +++K
Sbjct: 527 ATRSQEGVAPALLQAVFRMPRPEQQDKPNYSGVALSNGDYVVVRLNGVNEPEAALSDEEK 586

Query: 586 KAMVQGITQNNAQIVFEALMSNLRKEAKIK 615
               + +     Q  F A    L  EAKI+
Sbjct: 587 LNFRRFLASRVGQQDFAAFRQKLHAEAKIE 616