Pairwise Alignments

Query, 623 a.a., Peptidyl-prolyl cis-trans isomerase D from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 632 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  161 bits (407), Expect = 9e-44
 Identities = 163/600 (27%), Positives = 266/600 (44%), Gaps = 40/600 (6%)

Query: 1   MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLI-GGGNNYAAKVNDQKISRGQFENAF 59
           M+D+LR  + S + K + G++++SF + GV+ Y++ GGG   A  V  Q    G   N F
Sbjct: 1   MLDALRRGSKSWLAKSLLGLLVLSFGVWGVADYMVRGGGPKPAITVGGQSFGAGYVRNQF 60

Query: 60  NSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQ 119
           + +  R+++Q      EL A +     L  Q +  ++  A+LD+  R L L  SD+ ++ 
Sbjct: 61  SEDLGRLRRQ----GIELDAEQAIAMGLLGQTVQTIVQGAVLDESGRRLGLVASDDALRS 116

Query: 120 AIFATPAFQ-VDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKG 178
           AI   P F+  DG+FD  R + IL    +T   Y    R  +  + L+  V     +   
Sbjct: 117 AIQNDPLFKGADGRFDRDRLSRILAANNLTEAGYIDLRRRDMIREALVEPVVSAVGVPGP 176

Query: 179 ETDELAALVAQQRVVREATIDVNAL-AAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIK 237
             D LAA  +++RV +  T+   AL A     TE+ +    ++N + F  PE      + 
Sbjct: 177 IVDVLAAHASERRVAQVLTVAKAALPAPTTKPTEEALEKVRQENLDRFTAPEYRTAKALL 236

Query: 238 L--DAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDF 295
           L  DA      V+D  I  YY+ H D+F QP   R +     + ++A + L  +      
Sbjct: 237 LTRDAVAGSITVADEAIAQYYEAHGDEFVQPASRRVTQALFSSREQADSALVLIRS---- 292

Query: 296 AALAKEKSADIISARNGGDMGWLEDATIPDEL-KNAGLKEKGQLSGVIKSSVGFLIVRLD 354
           ++ + ++++  I+     DMG + D+++P  L      ++ G +    +S +G+ +  + 
Sbjct: 293 SSASLDEASRKITGSGAIDMGNVTDSSLPAPLPATIAAQDVGVVGEPAQSPLGWHLFLVT 352

Query: 355 DIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKAT 414
              P   K L EV   I   +  ++A+D+ YAL  +V D  +      AG ++ A     
Sbjct: 353 AATPETTKPLAEVAPQIRKTLASDQAVDSLYALSTQVEDLLAGG----AGIDEVATQVGL 408

Query: 415 QTGWFSKDNLPEELNFKPV----ADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRISE 470
               FS D+     +  P     +D  F   L G     G  S +I  +G   F+ R+  
Sbjct: 409 PLLAFSVDSQGNSQDGTPAKGLPSDGAFLKTLFGL--GEGEVSPMIDYEGG-FFIQRLET 465

Query: 471 HKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAA--GLKFGE 528
             P A +PL  V+ +V AL Q  +    A   AE LL   KAG   E + AA    +   
Sbjct: 466 ITPRAPRPLDAVRAEVVALWQDQEQTATAGRLAEGLLSRAKAGASFEDLAAAEPASRLST 525

Query: 529 PKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGNVV---------LLALDEVKQGS 579
              ++R GR     AA A PLP        M    QG+VV         LL + E++Q S
Sbjct: 526 TPPVTRDGRS--DGAAEADPLPG--ALVQAMFAARQGDVVRADGSDGVSLLRVLEIRQPS 581