Pairwise Alignments

Query, 590 a.a., HTH-type transcriptional regulator SgrR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 33/180 (18%)

Query: 175 IFSGLTRFDNNTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLML 234
           +F GL  +   T     DLA  +E S DG  + F LR  + +HNG  + A  +   +  +
Sbjct: 58  LFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIERV 117

Query: 235 LQLPALDQ----LFISVKRIE--------------VTHPQCLTFFLHRPDYWLAHRLASY 276
           +  PA        F ++K +E              V  P  + F L RPD    H +A  
Sbjct: 118 VN-PATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFLHVMALN 176

Query: 277 CSHLVHPQFPL-----------IGTGPFRLTQFT--AELVRLESHDYYHLRHPLLKAVEY 323
            +H+V P+  +           +G+G F+L ++T    LV     DY++   P L  + +
Sbjct: 177 FAHVV-PKEEVEKHGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDYWNEGLPKLDRITF 235