Pairwise Alignments

Query, 590 a.a., putative multidrug resistance ABC transporter ATP-binding/permease protein YheI from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 592 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA from Marinobacter adhaerens HP15

 Score =  252 bits (644), Expect = 3e-71
 Identities = 165/518 (31%), Positives = 275/518 (53%), Gaps = 14/518 (2%)

Query: 62  TMVLIAVVVY--LLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMAR 119
           TMV++ V  +  L  ++ +  +     Q+   LR D + +L      ++  +  G L+++
Sbjct: 76  TMVIVGVFAFRGLGTFLSQYFISYVGRQVINALRNDVFDRLMTLPSRYFDDNAAGRLVSK 135

Query: 120 ATNDVDRVVFAAGEGV-LTLVDSLVMGCAVLIMMSTQISWQLTLFALLPMPVMAIMIKRN 178
            T +V++V  A    V +TL + L +   +  M  T  +W+LTL  L   P++A ++   
Sbjct: 136 LTFNVEQVAEATTNAVTITLREGLTIVGLLGYMFYT--NWKLTLIFLAVGPLIAAVVSYA 193

Query: 179 GDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVA 238
                +  K  Q +   +     ES+T  R+++ FG ED +   F    +   K+++++A
Sbjct: 194 SKRFRKISKRIQGSMGDITHVASESITGYRVVRTFGGEDYERQRFQEVNDKNLKQSLKMA 253

Query: 239 RIDARFDPTIYIAIGMANLLAIGGGSWMV----VQGSLTLGQLTSFMMYLGLMIWPMLAL 294
              A   P I + +     +AI G  WM+    ++G ++ GQL +F+     M  P+  +
Sbjct: 254 STQAISVPVIQVLVA----IAIAGLVWMMLAPEIRGEMSTGQLVAFITAATTMAKPIRQV 309

Query: 295 AWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALEN 354
             +   +++G AA   +   + E+P  + G+       G+++ +   F Y       LE 
Sbjct: 310 TSVHAKIQKGVAAAYDVFETIDESPEQDPGTYSPDRVEGDIEFDEVAFRYRDQLDNVLEG 369

Query: 355 VNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAV 414
           ++ ++  GQ + + G +GSGKSTL+SL+ R ++ + GDIR     L    L + R ++A+
Sbjct: 370 ISLSIPAGQSVALVGRSGSGKSTLVSLLPRFYEYTGGDIRIDGHSLRDFSLKALRKQIAL 429

Query: 415 VSQTPFLFSDTVANNIALGC-PNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVML 473
           V+Q   LF+DT+A NIA G   + T +EI   A  A   + I R+P+G DT +G+ GVML
Sbjct: 430 VTQNVVLFNDTIAANIAYGALRDCTPEEIREAAAKAHALEFIDRMPEGLDTMIGDNGVML 489

Query: 474 SGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSA 533
           SGGQ+QR++IARALL NA ILILD+A SA+D  +E  I   L    QGRT ++ AHRLS 
Sbjct: 490 SGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQEALETVMQGRTTLVIAHRLST 549

Query: 534 LTEASEIIVMQHGHIAQRGNHDVLAQQSGWYRDMYRYQ 571
           + +A  I+VM +G IA+ G HD L    G Y  +++ Q
Sbjct: 550 IEKADRILVMDNGRIAESGRHDELLAAGGAYAQLHQMQ 587