Pairwise Alignments

Query, 673 a.a., UvrABC system protein B from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 985 a.a., excinuclease ABC subunit B from Sinorhizobium meliloti 1021

 Score =  776 bits (2004), Expect = 0.0
 Identities = 398/680 (58%), Positives = 496/680 (72%), Gaps = 31/680 (4%)

Query: 6   KLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAP 65
           ++ S ++P+GDQP AI  L +GL  G  +Q LLGVTGSGKTFT+A VI   QRP ++LAP
Sbjct: 159 RMQSDYEPAGDQPTAIADLVDGLTSGERNQVLLGVTGSGKTFTMAKVIEATQRPAVILAP 218

Query: 66  NKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLS 125
           NKTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAYVP SDT+IEK++S+NE I++MR S
Sbjct: 219 NKTLAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHS 278

Query: 126 ATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARND 185
           AT+++LER DV++VASVS IYG+G  + Y  M   ++VG  +DQR +L  L   QY R D
Sbjct: 279 ATRSLLERDDVIIVASVSCIYGIGSVETYTAMTFQMSVGDRLDQRQLLADLVAQQYKRRD 338

Query: 186 QAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYP 245
             FQRG+FRVRG+ I+IFPA  +D A R+ +F +E++ ++ FDPLTGQ    +    IY 
Sbjct: 339 MDFQRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLKSVKIYA 398

Query: 246 KTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSG 305
            +HYVTPR  +  A++ IKEE++ R   L    +LLE QRL QRT++D+EM+   G C G
Sbjct: 399 NSHYVTPRPTLNAAIKAIKEEMSQRLAELERAGRLLEAQRLEQRTRYDIEMLEATGSCQG 458

Query: 306 IENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYG 365
           IENYSR+L+GR PGEPPPTLF+Y+P + L+ +DESHVTIPQIGGMYRGD  RK TL EYG
Sbjct: 459 IENYSRYLTGRRPGEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYG 518

Query: 366 FRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEV 425
           FRLPS +DNRPL+FEE++A+ P TI VSATPG +E+E++GG   +QV+RPTGL+DP +EV
Sbjct: 519 FRLPSCMDNRPLRFEEWDAMRPDTIAVSATPGAWEMEQAGGVFAEQVIRPTGLIDPPVEV 578

Query: 426 RPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVER 485
           R   TQVDD+L EIR+ AA   R LVT LTKRMAEDLTEYL E G RVRY+HSDIDT+ER
Sbjct: 579 RSAKTQVDDVLGEIRETAAAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLER 638

Query: 486 MEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARN 545
           +EIIRDLRLG FDVLVGINLLREGLD+PE   VAILDADKEGFLRSE SLIQTIGRAARN
Sbjct: 639 IEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARN 698

Query: 546 VNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAK 605
           V+GK ILY D IT SM +A+ ET RRREKQ  YN EHGITP+ +  K+ DIL        
Sbjct: 699 VDGKVILYADTITGSMQRAMEETSRRREKQMAYNAEHGITPESVKAKISDIL-------- 750

Query: 606 TKAKGRGKSRPIVEPDNVPMDMSPKA--------------LQQKIHELEGLMMQHAQNLE 651
                      + E D+V  D+S  A              LQ  ++ LE  M   A +L+
Sbjct: 751 ---------DSVYERDHVRADISGVAGKGFADGGHLVGNNLQAHLNALEKQMRDAAADLD 801

Query: 652 FEEAAQIRDQLHQLRELFIA 671
           FE+AA++RD++ +L+   +A
Sbjct: 802 FEKAARLRDEIKRLKAAELA 821