Pairwise Alignments

Query, 366 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 335 a.a., phage late control gene D protein (GPD) from Phaeobacter inhibens DSM 17395

 Score =  152 bits (383), Expect = 2e-41
 Identities = 103/352 (29%), Positives = 178/352 (50%), Gaps = 36/352 (10%)

Query: 15  PAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDAD--GKIVLPRRGAVVTL 72
           P F + ++G+DI++ L  RL+ L+LTD  G ++D + + L D    G++  P+ GA + +
Sbjct: 8   PFFRVEVDGKDISSTLAPRLISLSLTDAAGVQSDNVQITLSDTTLFGRLAEPKAGAEIRV 67

Query: 73  ALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRET------LNTRREKSWHK-T 125
            LG+  Q  +  G F  D +   G PD++TI   ++   ET      L  ++++SW   T
Sbjct: 68  WLGYPFQLKY-MGLFIADNVIVGGPPDQMTITGIASVNGETSSGKTALTDQKKRSWPSGT 126

Query: 126 TVGEVVKEIASRHKLKMALGKDLSDKLVEHIDQTNESDGSFLMRLARQYGAIASVKNGNL 185
           T+  +V++IA  H L+ A+ + L+   + HIDQ +ESD + L R+AR + AIA   NG L
Sbjct: 127 TISALVQKIAGEHGLEHAVSESLAKVALSHIDQIDESDINLLSRIARDHDAIAKPGNGRL 186

Query: 186 LFIRQGQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKKESTTV 245
           +  ++G+  +A+G P+PV++IT K                  I+ W +     +K  + V
Sbjct: 187 IMAKRGESLTASGAPMPVLSITPKK-----------------ISRWQYQNSTREKAGSVV 229

Query: 246 KRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFS 305
                    +   + K  + + G  E    L R + N+  AE+AA  + +RL+R     S
Sbjct: 230 ------AVYQDHGKGKSVECIAGEGEPKQRLKRRFPNKDAAEQAAASELQRLKRAGRGLS 283

Query: 306 LQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELE 357
           + +  G  D   E  +  +GF+  + D EW IT   H++    G+ T++  E
Sbjct: 284 VTM-PGDPDAMAEAKLSAAGFRSYV-DGEWLITKAEHSLD-SGGYRTAISAE 332