Pairwise Alignments

Query, 283 a.a., 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 274 a.a., 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (269), Expect = 2e-28
 Identities = 87/256 (33%), Positives = 127/256 (49%), Gaps = 20/256 (7%)

Query: 9   AKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVE----HED 64
           AK+NL L IT +R DGYH L+T+F  +   D + I    + D +      G+E     ED
Sbjct: 7   AKINLGLSITEKRPDGYHNLETVFYPVALEDALEIRTSPEADKKFSLHQYGMEISGNPED 66

Query: 65  NLIVRAARLLMKTAADSGRLPTGSGADISIDKRLPMGGGLGGGSSNAATVLVALNHLWQC 124
           NL+V+A  LL K   +    P     +I + K +P G GLGGGSS+AA +L  LN  +Q 
Sbjct: 67  NLVVKAYLLLDK---EFHLCPI----EIHLYKHIPSGAGLGGGSSDAAFMLKLLNEHFQL 119

Query: 125 GLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWY--LVAHPGVSIPTP 182
            LS D+L     TLGAD   F+R    FAEGVG I +P+    K Y  L+  P V + T 
Sbjct: 120 NLSEDQLEIYAATLGADCAFFIRNAPTFAEGVGNIFSPIPLSLKGYQILIIKPDVFVSTR 179

Query: 183 VIFKD--PELPRNTPKRSIETLL---KCEFSNDCEVIARKRFREVDAVLSWLLEYAP--S 235
             F +  P  P  + K +I+  +   K    ND E     +   +  + + L       +
Sbjct: 180 EAFANIHPHHPEYSIKEAIKRPVNEWKEILINDFEDSVFPQHPVIGEIKAELYRQGAVYA 239

Query: 236 RLTGTGACVFAEFDTE 251
            ++G+G+ V+  F+ E
Sbjct: 240 SMSGSGSSVYGLFEPE 255