Pairwise Alignments

Query, 661 a.a., Cyclic di-GMP phosphodiesterase PdeR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  352 bits (903), Expect = e-101
 Identities = 199/541 (36%), Positives = 312/541 (57%), Gaps = 7/541 (1%)

Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174
           +V +     IV+L+    ++  N   E  TGL   D+ G+   +LF S            
Sbjct: 292 KVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPA-RLFASGLHENDFLATVA 350

Query: 175 VFFRSGNAYEVELWIPTRKGQRLF-LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233
                   +  E+W   R+G           V + +G+   + + + TDIT+ +R +E +
Sbjct: 351 AEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHY-VAAITDITKRKRDEEHI 409

Query: 234 RILANTDSITGLPNRNAMQELIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQ 291
           R  AN D +T LPNR+ + + ++ A++ A     +V V++LDLD FK++ND+YGH  GD+
Sbjct: 410 RFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDE 469

Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLI 350
           +L+  +  + +C+     + R GGDEF+V+ SN   Q A   +A +IL  L  PF IG  
Sbjct: 470 VLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGT 529

Query: 351 EVYTSCSVGIALSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410
           EV+   SVGI   P+HG  +  ++R+AD AMY AK+GG  ++ +FTP+M +R    L ++
Sbjct: 530 EVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTME 589

Query: 411 TNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470
           ++LR AL  D+  +H+QPK+     +   EAL+RW+ PE+GLI P DFI  AEESGLI+P
Sbjct: 590 SDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILP 649

Query: 471 LGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529
           +GRW + +   +V  WR +G+ +  V+VN+S RQ  DQT+   ++Q+L E   E   +D+
Sbjct: 650 IGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDL 709

Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589
           E+TE+ +  + E A+  ++    LG  + +DDFGTGYSSL+ L  FPID +K+DQ FVRD
Sbjct: 710 EITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRD 769

Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649
           +       ++V  I+A+A+ L   V+AEGVE  ++  FL        QGFL+++P+P   
Sbjct: 770 VLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAE 829

Query: 650 F 650
           F
Sbjct: 830 F 830