Pairwise Alignments

Query, 661 a.a., Cyclic di-GMP phosphodiesterase PdeR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  331 bits (848), Expect = 1e-94
 Identities = 205/563 (36%), Positives = 310/563 (55%), Gaps = 33/563 (5%)

Query: 110  LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169
            L  A  V S +   I + D +G+I   N      T  +  +V+G++   L         S
Sbjct: 749  LLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARIL--------QS 800

Query: 170  RRNNRVFF-------RSGNAYEVELWIPTRKGQ------RLFLFRNKFVHSGSGKNEIFL 216
             R NR F+        +  ++  E+W   R G+       +   RN   H G   N I +
Sbjct: 801  GRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRN---HQGEVTNYIGI 857

Query: 217  ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQELIDHAINHA--DNNKVGVVYLDL 274
                +D++  + ++ +   LA+ D +TGLPNR  ++  +DHAI  A     +  V++LDL
Sbjct: 858  F---SDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAVLFLDL 914

Query: 275  DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAM 333
            D FK +ND+ GH  GD LLR +   + +CL     LAR GGDEF+ +  +     A+  +
Sbjct: 915  DRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDIDGIPAVGTI 974

Query: 334  ASRILTRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSAAIIRHADTAMYTAKEGGRGQF 392
            A  +L RLR P R+    EV    SVGI+L PE G +   +++HADTA+   K  G G +
Sbjct: 975  ALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAGGGAY 1034

Query: 393  CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451
              +T  + +R+   L L+  LR ALE    ++HYQP I    GEV  +EALVRW   +  
Sbjct: 1035 GFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWAGGDGL 1094

Query: 452  LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRV-AVNISARQLADQTIF 510
            LIPP  FI  AE++GLIVPLG WV+ +  R + +WR +G+ L V AVN+S RQ  D  I 
Sbjct: 1095 LIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNLSPRQFRDHAIP 1154

Query: 511  TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570
              +++VL++       +++E+TES ++E    A + +     LG ++ +DDFGTGYSSL+
Sbjct: 1155 ALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAIDDFGTGYSSLA 1214

Query: 571  QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630
             L RFPID IK+DQ FVRDI +   ++ +   I+A+ + L L V+AEGVE+  +  FL++
Sbjct: 1215 NLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQLDFLSR 1274

Query: 631  NGINERQGFLFAKPMPAVAFERW 653
               +  QG+LF++P+ A A E+W
Sbjct: 1275 KQCDSAQGYLFSRPITAAALEKW 1297