Pairwise Alignments

Query, 661 a.a., Cyclic di-GMP phosphodiesterase PdeR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 809 a.a., sensory box/GGDEF family protein from Marinobacter adhaerens HP15

 Score =  330 bits (846), Expect = 2e-94
 Identities = 192/549 (34%), Positives = 311/549 (56%), Gaps = 12/549 (2%)

Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR---R 171
           + + ++ S+++I D +  I+  N+     TG +   +IG+    L  +  E   SR   +
Sbjct: 256 KAIEQSPSSVLICDRQWRIEFANQKFTQLTGYEAASIIGKHPGALGDNDIENRDSRHLWQ 315

Query: 172 NNRVFFRSGNAYEVELWIPTRKGQRLF--LFRNKFVHSGSGKNEIFLICSGTDITEERRA 229
           + R+  +    ++ E+    R G+R +  L          G     ++  G DI+  +R 
Sbjct: 316 SIRLQVQRVGVWQGEVNSVRRNGERFWEQLIVTPIKDEAGGTTGYLIL--GEDISIRKRY 373

Query: 230 QERLRILANTDSITGLPNRNAMQELIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHL 287
           +++L   AN D +TGLPNR    + +  A+  A  ++  VGV++LDLDNFK +ND  GH 
Sbjct: 374 EQQLLRQANYDILTGLPNRMLALDRLKLALAQARRESTLVGVMFLDLDNFKHINDTLGHD 433

Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFR 346
            GD LL + +  I SCL     +AR GGDEFLV+    T   A   +A RIL     P+ 
Sbjct: 434 AGDNLLIEAARRISSCLRGTSTVARLGGDEFLVILPGLTGPEASSQVAERILKTFSPPYI 493

Query: 347 IGLIEVYTSCSVGIALSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406
           +   EV+ + S+GIA+ P    +S  +++HAD AMY AK  G+  F  F PEM +   E 
Sbjct: 494 LNGQEVFVTTSIGIAIFPTDSDNSGTLLQHADAAMYQAKHKGKSSFAHFAPEMTEVSHER 553

Query: 407 LWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEES 465
           L +++++R+ALE  +  +++QP + T  G + S+EAL+RW +P  G++ P  FI  AEE+
Sbjct: 554 LKMESSMRRALELKEFELYFQPIVNTDSGTLCSVEALLRWNNPAMGMVMPDRFIPLAEET 613

Query: 466 GLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVLQELNFEY 524
           GLI P+G WV+L+  R    W++  G ++ ++VN+S RQ  D     A+   L       
Sbjct: 614 GLITPIGEWVLLEACRAAMGWKEATGKDIGISVNVSPRQFRDPGFTEAVMHALATSGLAP 673

Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584
             +++E+TE  +++N      +++Q  + G ++ +DDFGTGYS+LS L  +P D +K+D+
Sbjct: 674 EQLELEITERLILDNSIETAEILRQLDKAGIRLSVDDFGTGYSALSYLKSYPFDTLKIDK 733

Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644
            FV+D+ K+P   SLVRAI+ +A +L L+VIAEGVE   +  FL K G +  QG+ +++P
Sbjct: 734 SFVQDVMKEPEDASLVRAIINMAHSLGLRVIAEGVEEEAQTHFLKKEGCDFSQGYFYSRP 793

Query: 645 MPAVAFERW 653
           +PA  F+ W
Sbjct: 794 LPAADFDAW 802