Pairwise Alignments

Query, 296 a.a., Putrescine export system permease protein SapC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

 Score =  322 bits (825), Expect = 6e-93
 Identities = 162/293 (55%), Positives = 210/293 (71%), Gaps = 1/293 (0%)

Query: 4   DSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQL 63
           DS+Y E+  P      WR F ++  AM GL+    +A++ I   W APY   Q      L
Sbjct: 4   DSIYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYD-PQMHSSVLL 62

Query: 64  LPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGAT 123
           LPPSW   G V +FLGTDDLGRD+LSRL+ G+  ++G A ++TL AT+ G  +G  AG T
Sbjct: 63  LPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMT 122

Query: 124 HGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHD 183
            GL S+ LNHILDT+++IPSLLLAII VAF G    + + A+ LAL+PR +RS+Y  VH+
Sbjct: 123 KGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHN 182

Query: 184 ELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQL 243
           E+EK+YV+AARLDGA+   +LW ++ PNI   +V EIT ALS+AILDI ALGFL LGAQ 
Sbjct: 183 EVEKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQS 242

Query: 244 PSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE 296
           PS EWGAMLGD++ELIY+APWTV LPG AIM +V+++NL+GDG R+A+ AGVE
Sbjct: 243 PSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295