Pairwise Alignments

Query, 296 a.a., Putrescine export system permease protein SapC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 310 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  174 bits (442), Expect = 2e-48
 Identities = 107/279 (38%), Positives = 147/279 (52%), Gaps = 6/279 (2%)

Query: 14  GTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYG-IDQQFLGYQLLPPSWSRYG 72
           G     WR+F ++  A++GL     L  + IF    AP+  +     G +LLPP     G
Sbjct: 30  GRAYMTWRRFSANRLAVLGLCILLALVFVAIFADALAPHSPVIGNLAGARLLPP-----G 84

Query: 73  EVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLN 132
              + LGTDD GRD+LSRL+ G+  T+    +V + A   GL++G  AG   G   AVL 
Sbjct: 85  SEGYLLGTDDQGRDILSRLIHGSRLTLLVVLLVAIIAAPVGLIVGAVAGYAGGWVDAVLM 144

Query: 133 HILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIA 192
            I D  LA P L+LA+  VA  GP + +A+ A+ +   P   R   +        +Y+ A
Sbjct: 145 RITDIFLAFPKLVLALAFVAALGPGIENAVIAIAITSWPPYARIARAETLTVRNSDYIAA 204

Query: 193 ARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAML 252
            RL GAS L I++  VMP   + L+  +T  ++  IL  A LGFL LGAQ P PEWGAM+
Sbjct: 205 VRLMGASPLRIVFRHVMPMCMSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMI 264

Query: 253 GDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAI 291
                 I    W   +PG AI+I  L  NLLGDG+R A+
Sbjct: 265 ASGRRFILDQWWVATMPGIAILIVSLGFNLLGDGLRDAL 303