Pairwise Alignments

Query, 296 a.a., Putrescine export system permease protein SapC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 302 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  218 bits (556), Expect = 1e-61
 Identities = 115/272 (42%), Positives = 167/272 (61%)

Query: 20  WRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLG 79
           W  F  +  A++GL+    L +L IF    AP+    QF    LLPP W   G  +F LG
Sbjct: 24  WYYFSENRGAVIGLFFFLFLVLLAIFAPLVAPHNPTIQFREAVLLPPVWQEGGRATFLLG 83

Query: 80  TDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLL 139
           TD +GRD+LSRL+ G   ++    +VT+ +   G+++G  AG   G    V+  ++D +L
Sbjct: 84  TDAVGRDMLSRLIYGTRFSLFVGVIVTVLSLTGGILVGVIAGYFRGWIDTVIMRVMDIIL 143

Query: 140 AIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGAS 199
           A PSLLLA+++VA  GP L++AM A+ L   P  VR   + V  E  ++YV+AA++ GA 
Sbjct: 144 AFPSLLLALVLVAVLGPGLTNAMIAIALVFQPHFVRLTRAAVMTEKTRDYVVAAKVAGAG 203

Query: 200 TLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELI 259
              +++  ++PN  A L+ + T + S AILD AALGFL +GAQ P+PEWG ML +A E I
Sbjct: 204 HARLMFKTILPNCMAPLIVQATLSFSSAILDAAALGFLGMGAQPPTPEWGTMLAEAREFI 263

Query: 260 YVAPWTVMLPGAAIMISVLLVNLLGDGVRRAI 291
             A W V LPG AI+++VL +NL+GDG+R A+
Sbjct: 264 LRAWWVVTLPGLAILVTVLAINLMGDGLRDAL 295