Pairwise Alignments

Query, 430 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 436 a.a., sorbitol-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 80/318 (25%), Positives = 125/318 (39%), Gaps = 39/318 (12%)

Query: 46  ISKLIARFEKENPGITVKQVPVEEDAYNTKVIT-LSRSGSLPEVIETSHDYAKVMDKEQL 104
           + KL   F  +NP I ++ V +EE+    +V T ++  G   +++        +  K+  
Sbjct: 38  MQKLTDDFTSKNPDIQLEWVTLEENVLRQRVTTDIATKGGQYDIMTIGTYEVPIWAKQGW 97

Query: 105 IDRKAVATVISNVGEGAFYDGVLRIVR---TEDGSAWTGVPVSAWIGGIWYRKDVLAKAG 161
           +        + ++G     D +L  +R   T DG  +   P       + YRKD+  KAG
Sbjct: 98  L------LPLDDLGPEYDVDDLLPAIRSGLTIDGKLYAA-PFYGESSMVMYRKDLFEKAG 150

Query: 162 LEEPK--NWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNA--- 216
           L  P    W  + D A+K+ D  N+ YGI L          +F    L+  AN F A   
Sbjct: 151 LTMPDAPTWDFIADAARKITDKGNEIYGICLRGKAGWGENMAF----LTATANAFGARWF 206

Query: 217 --EGKITLDTPEMMQALTYYRDLAANTMP---GSNDIMEVKDAFMNGTAPMAIYSTYILP 271
               K   D PE   AL +Y  L  +  P    SN   E    F  G   M I +T    
Sbjct: 207 DENWKPQFDQPEWKNALDFYVKLMNDAGPPGASSNGFNENLSLFQTGKCGMWIDATVAAS 266

Query: 272 AVIKEGD---PKNVGFVVPTEKNSAVYG---MLTSLTITAGQKTEETEAAEKFVTFMEQA 325
            V    +      VGF +  +      G      +L I AG  +++ E+A+KF+ +    
Sbjct: 267 FVTNPKESTVADKVGFALAPDTGLGKRGNWLWAWNLAIPAG--SQKAESAQKFIAWATGK 324

Query: 326 DNI------ADWVMMSPG 337
           D +        W  + PG
Sbjct: 325 DYLKLVAEKEGWANVPPG 342