Pairwise Alignments

Query, 583 a.a., Long-chain-fatty-acid--CoA ligase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  765 bits (1976), Expect = 0.0
 Identities = 378/555 (68%), Positives = 458/555 (82%), Gaps = 1/555 (0%)

Query: 23  LKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRA 82
           ++++W    P DVP  I+  +Y SL+D+FE SVA+YADQPAFVNMG  +T+RKLEERSRA
Sbjct: 1   MEQLWTKNLPHDVPAIIDAKQYSSLIDLFESSVAKYADQPAFVNMGATLTYRKLEERSRA 60

Query: 83  FAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS 142
           FAAYLQ  L L+KGDRVA+MMPNLLQYP+ALFGILRAGM+VVNVNPLYTPREL+HQLNDS
Sbjct: 61  FAAYLQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDS 120

Query: 143 GASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHL 202
           GA AIV+VSNFA+TLE+VV++T V+ VILT +GD LS  K T+VNFVVKYIK++VPKYHL
Sbjct: 121 GAKAIVVVSNFANTLEQVVEQTPVKSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHL 180

Query: 203 PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA 262
           P AIS R +L  G R+QYVKP +  +D+AFLQYTGGTTGV+KGAMLTH N+++NL Q +A
Sbjct: 181 PHAISMRQSLSKGRRLQYVKPTIKGDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADA 240

Query: 263 TYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF 322
            Y PLL  GKE VVTALPLYHIFALT+NCLLF+  G  NLLITNPRDIP  V EL K+PF
Sbjct: 241 AYSPLLADGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPF 300

Query: 323 TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT 382
           TA+TGVNTLFNAL++++EF+ LDFS+L LS GGGM VQ+ VA++W  +T   LLEGYGLT
Sbjct: 301 TALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADKWQGITKTRLLEGYGLT 360

Query: 383 ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ 442
           E +PL++  PY+++ ++GSIG PV +T+ ++ D++ N +P G+ GEL  KGPQVM GYWQ
Sbjct: 361 EASPLLTCCPYNLEGYNGSIGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQ 420

Query: 443 RPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPG 501
           RP+ T ++I K+G+L TGDI  MDE+GF  IVDRKKDMILVSGFNV+PNE+E+VV  HP 
Sbjct: 421 RPEETAKVIDKDGYLATGDIGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPK 480

Query: 502 VQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKS 561
           V EVAAVGVP   SGE VK+FVV KD SLTEE ++  CR  LTGYK+PKLVEFRDELPKS
Sbjct: 481 VLEVAAVGVPHEVSGELVKVFVVPKDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKS 540

Query: 562 NVGKILRRELRDEAR 576
           NVGKILRRELRDEA+
Sbjct: 541 NVGKILRRELRDEAK 555