Pairwise Alignments

Query, 481 a.a., Ribosomal RNA small subunit methyltransferase F from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 470 a.a., sun protein from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 3e-26
 Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 33/261 (12%)

Query: 77  WIERDNEDALPLGST------------AEHLSGLFYIQEASSMLPVAALFADGNAPQRVM 124
           W ER     LP GS             +    G +++Q+A++ +P A LF D +  ++V+
Sbjct: 221 WAERLAGTVLPTGSVRLQEFSGSIPSLSGFSEGAWWVQDAAASIP-ARLFGDISG-KKVV 278

Query: 125 DVAAAPGSKTTQIAARMNNEGA-ILANEFSASRVKVLHANISRCGISNVALTHFDGRVFG 183
           D+ AAPG KT Q+       GA + A + S+SR++ L AN+ R G    A T  +  +  
Sbjct: 279 DLCAAPGGKTAQLVLA----GAEVTALDQSSSRLRRLKANLERLGFE--ARTK-ESDMAE 331

Query: 184 VAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGT 243
               E+FDA LLDAPCS  G  R+ PD L    P+  +++A  Q  L+  A   ++PGG 
Sbjct: 332 FRPEELFDAALLDAPCSSTGTTRRHPDVLWTKGPQDVEKLARLQERLLRHALTLVKPGGL 391

Query: 244 LVYSTCTLNREENEAVCMWLKETYPDAVEFLPLGEL-FPAANKALTEEGFLHVFPQIYDC 302
           +V+S C+L+  E E V    +       E +P+    +P   KA+T  G     P +   
Sbjct: 392 IVFSNCSLDPLEGEEVV--ARVVADSGCERVPIDAADWPGLEKAITALGEFRTTPAMLPL 449

Query: 303 E--------GFFVARLRKTQA 315
           E        GF+ A LR+  A
Sbjct: 450 EPPFAGGLDGFYAAVLRRAGA 470