Pairwise Alignments

Query, 336 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Sinorhizobium meliloti 1021

 Score =  417 bits (1071), Expect = e-121
 Identities = 210/333 (63%), Positives = 258/333 (77%), Gaps = 2/333 (0%)

Query: 1   MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLI 60
           M EA RLI A     ED+ D  +RP+ L+E+ GQ + R+ ++IFI+AA+ RG+ALDH+L 
Sbjct: 1   MSEAARLI-APEKRGEDL-DATMRPQTLDEFTGQAEARANLKIFIEAARNRGEALDHVLF 58

Query: 61  FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP 120
            GPPGLGKTTLA I+A E+GVN R+TSGPV+ KAGDLAA+LTNLE  DVLFIDEIHRL+P
Sbjct: 59  VGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNP 118

Query: 121 VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR 180
            VEE+LYPAMED+QLD++IGEGPAARS+KIDL  FTL+ ATTR G LT+PLRDRFGI  R
Sbjct: 119 AVEEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVR 178

Query: 181 LEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG 240
           L FY V +L+ IV R AR MGL M+D+GA E+ARRARGTPRIA RLLRRVRDFAEV    
Sbjct: 179 LNFYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVARAE 238

Query: 241 TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV 300
            ++  IA +AL  L VD+ G D +DR+ L  +   F GGPVG++ +AA + E R+ IED+
Sbjct: 239 AVTLKIADEALTRLLVDSMGLDQLDRRYLTMIAQNFGGGPVGIETIAAGLSEPRDAIEDI 298

Query: 301 LEPYLIQQGFLQRTPRGRMATTRAWNHFGITPP 333
           +EPYLIQQGF+QRTPRGR+ T  AW H G+ PP
Sbjct: 299 IEPYLIQQGFIQRTPRGRVLTANAWKHLGLNPP 331