Pairwise Alignments

Query, 336 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  426 bits (1094), Expect = e-124
 Identities = 209/331 (63%), Positives = 261/331 (78%), Gaps = 2/331 (0%)

Query: 3   EADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFG 62
           E +RLIS      E   D A+RP+ L ++VGQ Q R  + +F++AA+ RG+A+DH+L  G
Sbjct: 7   EDERLISGRRR--EGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHG 64

Query: 63  PPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVV 122
           PPGLGKTTLA IVA E+GV  R TSGP++ KAGDLAA+LTNLEP DVLFIDEIHRL+P +
Sbjct: 65  PPGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAI 124

Query: 123 EEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLE 182
           EEVLYPAMED+QLD++IGEGPAARS++IDLPPFTL+GATTR+G LT+PLRDRFGI  RL+
Sbjct: 125 EEVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLD 184

Query: 183 FYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTI 242
           FY+  +L  IV+R +R +G+ ++D+GA EVARR+RGTPR+A RLLRRVRDFA V     +
Sbjct: 185 FYETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPV 244

Query: 243 SADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLE 302
            A IA  AL+ L VD  G D MDR+ L  + D + GGPVG+D LAAA+ EER+T+EDV+E
Sbjct: 245 DAFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIE 304

Query: 303 PYLIQQGFLQRTPRGRMATTRAWNHFGITPP 333
           PYLIQQGF++RTPRGRM T  AW H G+TPP
Sbjct: 305 PYLIQQGFIKRTPRGRMLTAIAWTHLGLTPP 335