Pairwise Alignments

Query, 240 a.a., Regulatory protein SdiA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 260 a.a., Transcriptional Regulator, LuxR family (NCBI) from Rhodospirillum rubrum S1H

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 29/198 (14%)

Query: 62  NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHGLR 116
           NY ++W  +Y  + FL IDPVL      Q   +W++ +  E+     + ++  AR  GL 
Sbjct: 61  NYKDSWSEHYFREGFLEIDPVLATCPDRQLPFLWSEAIAPESLSHDQRRMFSDARDAGLH 120

Query: 117 RGVTQYLMLPNRALGFLSFSRSSAREIPILSDELQLKMQLLVRES-----LMALM--RLN 169
            G +    +P R       S      + ++ ++     + L+ E      L+AL   R  
Sbjct: 121 DGYS----VPIRG------SHGEFATVTVIPEQGGDAARRLIGEQKHLVHLLALYFDRHA 170

Query: 170 DEIVMTPEMN-------FSKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKI 222
              V+   ++        S RE+E+L+W A GKTS EIA I  IS  +V FH  N +KK+
Sbjct: 171 RSTVINARLSSRRRKTVLSPREQEMLRWAALGKTSWEIAEIAGISTKSVEFHLDNAKKKL 230

Query: 223 NAPNKTQVACYAAATGLI 240
              +KT     A   GL+
Sbjct: 231 GTYSKTHAVVKALTLGLV 248