Pairwise Alignments

Query, 385 a.a., Glycine betaine uptake system permease protein YehY from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  106 bits (264), Expect = 8e-28
 Identities = 75/198 (37%), Positives = 104/198 (52%), Gaps = 25/198 (12%)

Query: 180 HLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIF-----SLLNVIQTVPSVALFGLLIAP 234
           HL  +F A + A ++ V L I     T + GA F     SL+N+ QT P          P
Sbjct: 54  HLRTVFVATVAATIVAVSLAI---IVTRKAGAEFLPLSRSLVNIGQTFP----------P 100

Query: 235 LAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGM 294
           +A L  A P      I G G  P LIAL LY LLP+    + GL  +P  V+E+AR  GM
Sbjct: 101 VAVLALAVP------IYGFGEKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGM 154

Query: 295 SGARRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFGALVFQGLLSSAIDLV 354
           +G +R   ++LPLALPV L  +R+ +V ++  A I + + A   G ++  GL S+ +  V
Sbjct: 155 TGRQRLFRIELPLALPVILTGIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFV 214

Query: 355 LLGVIPVIVLAVLT-DAL 371
           L G + V  LAVL  DAL
Sbjct: 215 LQGGLIVGALAVLIHDAL 232