Pairwise Alignments

Query, 294 a.a., Cytidine deaminase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 140 a.a., cytidine deaminase from Caulobacter crescentus NA1000

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 13/133 (9%)

Query: 49  EDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
           ED +A AL PL +  A    S F V A     +G  ++G N+E   A   Q   AEQ+AI
Sbjct: 11  EDEIAAALPPLLSR-AYARYSKFTVAAAVIDETGAVHYGVNVE--NAAYPQGTCAEQTAI 67

Query: 109 -SHAWLSGEKALAAITVN------YTPCGHCRQFMNELNSGLDLRIHLPG---REAHALR 158
            +    +G + +  + +         PCG CRQ + E        I + G    E  A  
Sbjct: 68  GAMITAAGARRIDKVLIAAGSGAVVQPCGGCRQRIAEFAGEACEIISVQGGKPTERVAFW 127

Query: 159 DYLPDAFGPKDLE 171
           D LP +FGP+DL+
Sbjct: 128 DLLPRSFGPRDLD 140



 Score = 23.5 bits (49), Expect = 0.003
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 189 DALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAF 233
           D ++ A     +R++  YSK     A+  + G +  G   ENAA+
Sbjct: 12  DEIAAALPPLLSRAYARYSKFTVAAAVIDETGAVHYGVNVENAAY 56