Pairwise Alignments

Query, 556 a.a., 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 554 a.a., Probable bifunctional menaquinone biosynthesis protein MenD : 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (SHCHC synthase) + 2-oxoglutarate decarboxylase (alpha-ketoglutarate decarboxylase) (KDC) from Mycobacterium tuberculosis H37Rv

 Score =  154 bits (390), Expect = 7e-42
 Identities = 154/503 (30%), Positives = 221/503 (43%), Gaps = 67/503 (13%)

Query: 11  AAVILEALTRHGVRHICIAPGSRSTPLTLAA--AENSAFIH-HTHFDERGLGHLALGLAK 67
           A V+++ L R GVR + + PGSR+ PL  A   A+ S  I  H   DER  G+LA+GLA 
Sbjct: 8   ARVVVDELIRGGVRDVVLCPGSRNAPLAFALQDADRSGRIRLHVRIDERTAGYLAIGLAI 67

Query: 68  VSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFA 127
            +  PV V +TSGTAVANL PA++EA      LI+L+A+RP EL+  GANQ + Q G F 
Sbjct: 68  GAGAPVCVAMTSGTAVANLGPAVVEANYARVPLIVLSANRPYELLGTGANQTMEQLGYFG 127

Query: 128 SHPTHSISL------PRPTQDIPARWLVST---IDHALG--TLHAGGVHINCPFAEPLYG 176
           +    SISL      P  T  + A W  +T   +  A G  T +AG VH + P  EPL  
Sbjct: 128 TQVRASISLGLAEDAPERTSALNATWRSATCRVLAAATGARTANAGPVHFDIPLREPLVP 187

Query: 177 EMDDTGLSWQ--QRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEG 234
           + +  G      +  G  W    P   + P L+ +   D         VV++G  +    
Sbjct: 188 DPEPLGAVTPPGRPAGKPWTYTPPVTFDQP-LDIDLSVD--------TVVISGHGAGVHP 238

Query: 235 KKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRL 294
              AL       P + +  +      P   L L        L + Q V+ LG     + +
Sbjct: 239 NLAAL-------PTVAEPTAPRSGDNPLHPLAL-------PLLRPQQVIMLGRPTLHRPV 284

Query: 295 LQWQASCEPEEYWIV-----DDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEI 349
               A  E   + +       D+ G       R     A    WL+          C  +
Sbjct: 285 SVLLADAEVPVFALTTGPRWPDVSGNSQATGTRAVTTGAPRPAWLDR---------CAAM 335

Query: 350 PRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPV 409
            R A  A++  +A         +A  +   L    QL +G S  VR +        G  V
Sbjct: 336 NRHAIAAVREQLAAHPLTTGLHVAAAVSHALRPGDQLVLGASNPVRDVALAGLDTRGIRV 395

Query: 410 YSNRGASGIDGLLSTAAGVQRA-------SGKP-----TLAIVGDLSALYDLNALAL--L 455
            SNRG +GIDG +STA G   A       +G P     T+A++GDL+ ++D + L +   
Sbjct: 396 RSNRGVAGIDGTVSTAIGAALAYEGAHERTGSPDSPPRTIALIGDLTFVHDSSGLLIGPT 455

Query: 456 RQVSAPLVLIVVNNNGGQIFSLL 478
             +   L ++V N+NGG IF LL
Sbjct: 456 EPIPRSLTIVVSNDNGGGIFELL 478