Pairwise Alignments

Query, 445 a.a., NADH-quinone oxidoreductase subunit F from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 429 a.a., NADH-quinone oxidoreductase, F subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  338 bits (868), Expect = 2e-97
 Identities = 181/396 (45%), Positives = 241/396 (60%), Gaps = 4/396 (1%)

Query: 30  RSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLC 89
           R +  ++G   A+     D I+N++K +GL+GRGGAGF TGLKWS MPKD      YL+ 
Sbjct: 24  RKRGDWDGTG-AILAKGRDGIINEMKASGLRGRGGAGFPTGLKWSFMPKDIGERPHYLVV 82

Query: 90  NADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAE 149
           NADE EPGT KDR +M   PH L+EG LI+ FA+ A+  YI++RGE+   A +L  AIAE
Sbjct: 83  NADEGEPGTCKDRDMMRFDPHKLIEGCLIAGFAMGAHVAYIYIRGEFFREAEHLEFAIAE 142

Query: 150 ATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGV 209
           A EAGLLG N  G+G+D E++VH GAG YICGEETALI SLEG++  PR KPPFPA  G+
Sbjct: 143 AREAGLLGPNACGSGWDMEVYVHRGAGAYICGEETALIQSLEGKKGQPRLKPPFPAGVGL 202

Query: 210 WGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTT 269
           +G PT VNNVE++   P IL  G  W+  + +  + GTK+   SG V  P   E   G  
Sbjct: 203 YGCPTTVNNVESIAVAPTILRRGGAWFAGLGRENNTGTKVFCISGHVNKPCNVEEEMGIP 262

Query: 270 AREILEDYAGGMRDGL-KFKAWQPGGAGTDFL-TEAHLDLPMEFESIGKAGSRLGTALAM 327
            RE+++ +AGG+R G        PGGA    L  E   D+ M+F+S+    S LGTA  M
Sbjct: 263 LRELIDKHAGGVRGGWDNLLGVIPGGASVPVLPRELCDDVLMDFDSLKAVKSGLGTAAVM 322

Query: 328 AVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQL 387
            +D   ++V  +  L  F+  ESCG CTPCR+G  W  +++  L  G+    +I+ LEQ+
Sbjct: 323 VMDKSTDIVRAIARLSAFYTHESCGQCTPCREGTGWLSRVMTRLVNGDAAIEEIDVLEQV 382

Query: 388 CRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423
            R +  G T CA    A  P+Q  I++FR E E  I
Sbjct: 383 TRQI-EGHTICALGDAAAWPIQGLIRHFRPEIERRI 417