Pairwise Alignments

Query, 445 a.a., NADH-quinone oxidoreductase subunit F from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 461 a.a., NADH dehydrogenase I, F subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  734 bits (1894), Expect = 0.0
 Identities = 349/442 (78%), Positives = 382/442 (86%), Gaps = 2/442 (0%)

Query: 6   RTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGA 65
           R  ETHPLTWRLRDD QPVWL+EY++K GY+  RKAL  +SPDEIV+ VKDAGLKGRGGA
Sbjct: 20  RAAETHPLTWRLRDDGQPVWLEEYQTKQGYDAVRKALGQMSPDEIVSTVKDAGLKGRGGA 79

Query: 66  GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125
           GF TG+KW LMPKDESMNIRYLLCNADEMEP T+KDRLLMEQLPHLL+EGM+ISA ALKA
Sbjct: 80  GFPTGVKWGLMPKDESMNIRYLLCNADEMEPNTWKDRLLMEQLPHLLIEGMIISAKALKA 139

Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185
           YRGYIFLRGEY++AA+NLRRA+ EA  AGLLGKNI+G+GFDFELFVHTGAGRYICGEETA
Sbjct: 140 YRGYIFLRGEYVDAAINLRRAVEEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETA 199

Query: 186 LINSLEGRRANPRSKPPFPATSGVWGKPTCVNNVETLCNVPAILANGVEWYQNIS--KSK 243
           LINSLEGRRANPR+KPPFPA SGVWGKPTCVNNVETLCNVPAI+ NGV WY  ++   S+
Sbjct: 200 LINSLEGRRANPRAKPPFPAVSGVWGKPTCVNNVETLCNVPAIIGNGVAWYHTLALPGSE 259

Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303
           D GTKLMGFSG+V NPG+WELPFG TARE+ E YAGGMR G + KAWQPGGAGT FL   
Sbjct: 260 DHGTKLMGFSGKVNNPGVWELPFGITARELFEGYAGGMRSGYRLKAWQPGGAGTGFLLPE 319

Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363
           HLD  M    IGK G+R+GT LAMAVD  I+MVSL+RN+EEFFARESCGWCTPCRDGLPW
Sbjct: 320 HLDAQMYTAGIGKVGTRMGTGLAMAVDDSISMVSLLRNMEEFFARESCGWCTPCRDGLPW 379

Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423
           SVK+LR+LERGEGQ GD+ TLEQLC FLGPGKTFCAHAPGAVEPL SAIKYFR EFEAGI
Sbjct: 380 SVKLLRSLERGEGQEGDLATLEQLCNFLGPGKTFCAHAPGAVEPLASAIKYFRSEFEAGI 439

Query: 424 KQPFSNTHLINGIQPNLLKERW 445
           K    N   I GIQPNLL ERW
Sbjct: 440 KGSGDNRKSIKGIQPNLLGERW 461