Pairwise Alignments

Query, 332 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 337 a.a., transporter, sodium/bile acid symporter family from Caulobacter crescentus NA1000

 Score =  335 bits (860), Expect = 7e-97
 Identities = 172/319 (53%), Positives = 233/319 (73%), Gaps = 4/319 (1%)

Query: 7   LDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIAGGGHWR 66
           ++P+ + L  +V+LAS  P RG        +   AIALLFF+HGAKLSREA++AG  HWR
Sbjct: 21  IEPYVIALFGMVVLASVLPVRGAAAEGLSVIVKLAIALLFFLHGAKLSREAVVAGVTHWR 80

Query: 67  LHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTSMAGGNV 126
           LHL ++  TFV+FP+LG++ +  K   +   L +G L+LC LP+TVQS+IAFTS+A GNV
Sbjct: 81  LHLTILAFTFVMFPVLGLVAS--KLGVLSSTLAAGMLFLCCLPSTVQSSIAFTSIARGNV 138

Query: 127 AAAVCSASASSLLGIFLSPLLVGLVMNVHG-AGGSLEQVGKIMLQLLLPFVLGHLSRPWI 185
           AAAVC+ASAS+L GIF++P+LV ++M+  G A G  E +  I++QLLLPF+LG L+RP +
Sbjct: 139 AAAVCAASASNLFGIFITPVLVSVLMHTQGGAAGGWESIQDIIVQLLLPFILGQLARPLV 198

Query: 186 GDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWGSLLFIVVVSCVLLAIVIV 245
             WV ++K+ +   D+ SILLVVY AFSEAVV GIW KV    ++ ++V  C+LLAIV+ 
Sbjct: 199 AKWVEKHKQLVGYVDRGSILLVVYAAFSEAVVGGIWSKVSALEMVVLLVACCILLAIVLA 258

Query: 246 VNVFMARRLSFNKADEITIVFCGSKKSLANGIPMANILFPTSVIGMMVLPLMIFHQIQLM 305
              + AR L F+K DEITI+FCGSKKS+A G+PMA ILFP    G++VLPLMIFHQIQLM
Sbjct: 259 ATTYGARALGFSKEDEITIMFCGSKKSMATGVPMAGILFPGPTAGVIVLPLMIFHQIQLM 318

Query: 306 VCAVLARRY-KRQTEQLQA 323
            C+V+A+ Y KR +E ++A
Sbjct: 319 ACSVIAQHYAKRPSEIVEA 337