Pairwise Alignments

Query, 303 a.a., Cysteine synthase B from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 288 a.a., cysteine synthase B (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  377 bits (968), Expect = e-109
 Identities = 194/290 (66%), Positives = 234/290 (80%), Gaps = 4/290 (1%)

Query: 3   TLEQTIGNTPLVKLQRMGPNNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD 62
           T+E  IG TPLV+LQR+   + S V LKLEGNNPAGSVKDRAAL+MI +AE R EI PGD
Sbjct: 2   TIEACIGQTPLVRLQRLDCGS-STVLLKLEGNNPAGSVKDRAALNMINQAELRQEIAPGD 60

Query: 63  VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
            LIEATSGNTGIALAM AA+KGY+M L+MP N +QER+ AM+AYGAEL+LV     ME A
Sbjct: 61  TLIEATSGNTGIALAMAAAIKGYKMILIMPSNSTQERKDAMQAYGAELLLV---DNMEAA 117

Query: 123 RDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGV 182
           RDLAL +   G+GK+LDQFNN DN  AH+ TTGPEIWQQ+ G+ITHFVSSMGTTGTI GV
Sbjct: 118 RDLALALQAEGKGKVLDQFNNQDNANAHFLTTGPEIWQQSQGKITHFVSSMGTTGTIMGV 177

Query: 183 SRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLPGIFNASLVDEVLDIHQRDAENTMR 242
           S++++ ++  +TIVGLQP +GSSIPGIRRWP EYLPGIF+A+ VD ++DI ++DA+   R
Sbjct: 178 SKYLKSRNPDITIVGLQPADGSSIPGIRRWPQEYLPGIFDAARVDLMMDIEEQDAKAMAR 237

Query: 243 ELAVREGIFCGVSSGGAVAGALRVAKANPGAVVVAIICDRGDRYLSTGVF 292
            LA  EGI  GVSSGGAV  AL +A+  PG+VVVAI+CDRGDRYLS+G+F
Sbjct: 238 ALAREEGICAGVSSGGAVYAALELARQYPGSVVVAIVCDRGDRYLSSGLF 287