Pairwise Alignments

Query, 338 a.a., Thiosulfate-binding protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 337 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  312 bits (799), Expect = 9e-90
 Identities = 162/328 (49%), Positives = 212/328 (64%), Gaps = 2/328 (0%)

Query: 6   LKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQS 65
           L++ +LAL  + +    +    LLN SYD +RE +   N  F Q W K  G +  T++QS
Sbjct: 7   LQQATLALTFTSVSFLALAENTLLNVSYDPTREFYREYNQLFSQYWQKQ-GHEAPTVRQS 65

Query: 66  HAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFL 125
           H GS  QA +++ GL+ADVVT     DV  L  K  LIP +WQSRLP+NSSP+ ST+  L
Sbjct: 66  HGGSGSQARSVIDGLEADVVTLALAYDVDALRQKADLIPENWQSRLPHNSSPYTSTIVLL 125

Query: 126 VRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKTEQFMT 185
           VRKGNPKNIHDWNDL R  V++I PNPKTSG AR+ YLAAWG A K  G ++ K  +F+T
Sbjct: 126 VRKGNPKNIHDWNDLARKGVEVITPNPKTSGGARWNYLAAWGYALKQYGSEE-KALEFVT 184

Query: 186 QFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAE 245
           Q  KNV V D+G RGAT TF +R +GDV I++E+E     +Q     FE+++P  +ILAE
Sbjct: 185 QIYKNVPVLDSGARGATNTFVQRQIGDVFIAWENEAFLAVEQLGKGEFEIIVPSVSILAE 244

Query: 246 FPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTEL 305
            PVA VDKNV   GT K A+AYL  LY+ +AQ +   ++YR  NP +  + KDKFPQ  L
Sbjct: 245 PPVAIVDKNVDRKGTRKLAEAYLAQLYTDEAQHLAAKHFYRPANPNISKQYKDKFPQLTL 304

Query: 306 FRVEDKFGSWPEVMKTHFTSGGELDKLL 333
           F ++D FG W +  +THF  GG  D +L
Sbjct: 305 FTIDDVFGGWNKAQQTHFNDGGYFDTIL 332