Pairwise Alignments

Query, 338 a.a., Thiosulfate-binding protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  391 bits (1005), Expect = e-113
 Identities = 204/336 (60%), Positives = 251/336 (74%), Gaps = 6/336 (1%)

Query: 1   MAVNLLKK--NSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGD 58
           M V L K    +L L ASL +A   Q   LLNSSYD+SRELF A NP F + W ++  G 
Sbjct: 1   MPVKLTKALLGTLLLGASLNVAAADQT--LLNSSYDISRELFNAYNPVFAKHW-QEKTGK 57

Query: 59  KLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPF 118
            + IKQSHAGSS QA +ILQGL ADVVT+NQVTDVQILHD+GKLIP +WQ  LPN SSP+
Sbjct: 58  TVEIKQSHAGSSAQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPY 117

Query: 119 YSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGD-K 177
           YST+ FLVRKGNPK I DW DL + DVKL+FPNPKTSGNARYTYLAA G A K  G D +
Sbjct: 118 YSTIAFLVRKGNPKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNE 177

Query: 178 AKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVI 237
           A  + F+ +FL NV VFDTGGRGATT+F ERG+GDVLI+FESEVNNIR+QY A G++VV+
Sbjct: 178 ASLDAFLKKFLGNVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADGYQVVV 237

Query: 238 PKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLK 297
           PKT+ILAEFPVA V+KN + NGT++ A  YL++LYS ++Q ++  + YRV+N +V+ +  
Sbjct: 238 PKTSILAEFPVAVVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFT 297

Query: 298 DKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLL 333
            +FP  EL  VE   G+W   MKT F +G +LD+LL
Sbjct: 298 KQFPTVELMTVEQIIGNWDNAMKTQFANGAKLDQLL 333