Pairwise Alignments

Query, 553 a.a., DNA repair protein RecN from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 577 a.a., DNA repair protein RecN (NCBI) from Rhodospirillum rubrum S1H

 Score =  311 bits (797), Expect = 4e-89
 Identities = 200/562 (35%), Positives = 305/562 (54%), Gaps = 12/562 (2%)

Query: 1   MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA 60
           ML+ L+I +  ++  L++ F  G+ V TGETGAGKSI +D+L L LG RA++ +VR GA 
Sbjct: 1   MLSALSIRDVVLIERLDLAFGPGLGVFTGETGAGKSILLDSLSLALGARADSALVRKGAP 60

Query: 61  RADLCARFSLK-DTPA-ALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLR 118
           +  + A F+L  D PA AL    +  ++     ++RRV+++DGRSR ++N     +  LR
Sbjct: 61  QLSVSAEFTLAADHPARALLGAADLGVDGSEPVVVRRVVTADGRSRAYVNDQPTSVGLLR 120

Query: 119 ELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETS-----LLQEMTARYQLWHQSCRDL 173
           +LGQ +++IHGQ     L  P   + +LDG+A   S     LL  + A +  W  +    
Sbjct: 121 QLGQSMVEIHGQFESHGLLDPASHRGVLDGFAGADSGQPAGLLPAVEAAHATWKAAVTAR 180

Query: 174 AHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALAL 233
              +       A  +LL++   EL     +PGE E + EE   L N  +L      AL  
Sbjct: 181 RRAEADLARARAEEDLLRHTGTELEALAARPGEEEALAEERALLMNGEKLAEGLNGALGA 240

Query: 234 MADGEDANLQSQLYTAKQLVSELIGMDS-KLSGVLDMLEEATIQIAEASDELRHYCDRLD 292
           ++  +   +++ L  A + +  +  M   +L GV++ LE A+++ AEA  +L+     LD
Sbjct: 241 LS--QPLPVETALRHAMRALERVAPMAGHRLDGVIEGLERASVEAAEAQAQLQAVIGALD 298

Query: 293 LDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTK 352
           +DP RL  +E+R+     LARKH ++ + LP   + +  +   L+   D    L  A   
Sbjct: 299 MDPRRLETVEERLFALRGLARKHGLTVDGLPALLEDIRRQIATLEGDEDLLGGLRKAEEN 358

Query: 353 HHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVK-FDEHHLGADGADR 411
                +E ARAL + R+Q A  L + +   +  L +   +F   ++   E   GA G DR
Sbjct: 359 ARATYVEAARALSRVRRQAAGALDRAVAAELPPLKLERARFVTTLEDLPEDQWGAAGLDR 418

Query: 412 IEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAA 471
           + F V TNPG    PI K+ASGGEL+R  LA++VI A   + P LIFDEVD GI G TAA
Sbjct: 419 VAFLVATNPGGDPGPIHKIASGGELARFMLALKVILAAGGDVPTLIFDEVDAGIGGATAA 478

Query: 472 VVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKETDG-AMTETHMQSLNKKARLQEL 530
            VG+ L +LG++ QV+ VTH PQVA  G +HY V K  DG     T + +L+   R++E+
Sbjct: 479 AVGERLARLGQAVQVLVVTHSPQVAAMGQRHYRVLKSDDGKGGFGTGVDALSPAERIEEV 538

Query: 531 ARLLGGSEVTRNTLANAKELLA 552
           AR+L G+ +T    A A+ LL+
Sbjct: 539 ARMLAGAHITDQARAAARSLLS 560