Pairwise Alignments

Query, 750 a.a., Carbamoyltransferase HypF from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 768 a.a., Hydrogenase maturation protein HypF (NCBI) from Rhodospirillum rubrum S1H

 Score =  443 bits (1139), Expect = e-128
 Identities = 303/777 (38%), Positives = 393/777 (50%), Gaps = 79/777 (10%)

Query: 9   VQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQLHQH-CPP 67
           ++L +RG VQGVGFRP V++LA  L L G V N G GV + +         ++ +H  PP
Sbjct: 23  LRLSVRGLVQGVGFRPTVYRLATGLGLRGFVLNTGAGVVIEVEGARAGEFAEILRHGAPP 82

Query: 68  LARIDSVEREPFIWSQLPTEFTIRQSAGGAMNT-QIVPDAATCHACLAEMNTPGERRYRY 126
            A I+++E      S     F I  S   A  T +I PD A C +CL+E+  P +RRYR+
Sbjct: 83  RAHIEALETHRLAASGRDEGFRIIDSDTAAPGTTRIGPDTAPCPSCLSELFDPADRRYRH 142

Query: 127 PFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGP 186
           PFI C  CGPR TI  A+PYDR  T M  F LC AC  +Y DP  RRFHA+  ACP+CGP
Sbjct: 143 PFIACCDCGPRHTIAGALPYDRARTAMGGFALCAACAADYADPASRRFHAELTACPDCGP 202

Query: 187 HLEWVSHGEHAEQEAALQAA--IAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRARKH 244
            L              L  A  + +++ G IVA+KG+GGF L CDA     V  LR  K 
Sbjct: 203 RL-------------TLDPADILREIRAGAIVALKGLGGFQLICDASQPAPVERLRRGKR 249

Query: 245 RPAKPLAVM---LPVAEGLPD---AARQLLTTPAAPIVLVDKK--YVPELCDDIAPGLNE 296
           R AKP A++   L  A  L D   A  + LT+P  PIVL+ ++    P L   IAPGL+ 
Sbjct: 250 RDAKPFALLVASLTDARALCDVRSAEAEALTSPERPIVLLHRRADARPPLAAAIAPGLDT 309

Query: 297 VGVMLPANPLQHLLLQE----------LQCP----LVMTSGNLSGKPPAISNEQALADLQ 342
           +GVMLP  PLQ+L+  E          L  P    LV TS N +G P  +   +  A+L 
Sbjct: 310 LGVMLPVTPLQYLIFHEAAGRPAGTAWLDQPTPLVLVATSANRAGAPLILEGAEVAAELG 369

Query: 343 GIADGFLIHNRDIVQRMDDSVVRESGEM---LRRSRGYVPDALALPLGFKNVPPVLCLGA 399
              D    H+R I+ R DD VVR  G+    +RR RG  P+ + L    + +PPVL LGA
Sbjct: 370 ADVDVLADHDRPILARADDGVVRVLGDQARSVRRGRGQTPEPIVLG---RALPPVLALGA 426

Query: 400 DLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVS 459
             KN+ C+ RG++A LSQH+GDL         R A+  +    D  P  V HD HP + S
Sbjct: 427 QWKNSVCVTRGDRAFLSQHIGDLDSRATLAFQRAAIDQLMRFVDTRPVVVAHDLHPDFAS 486

Query: 460 SQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLR 519
           S+ A  M LPT  + HHHAH AA  AEH   +D G ++ L LDG G+G++G  WGGE LR
Sbjct: 487 SRLAEAMGLPTIAIQHHHAHLAAVAAEHH--ID-GPLVGLALDGFGLGDDGGAWGGELLR 543

Query: 520 VNYRECQHLGGLPAVALPGGDLAAKQPWR---NLLAQCLRFVPEWQNYSETASVQQQNWS 576
           ++      LG L  +ALPGGD AA+QPWR   + LA+  R     + ++      Q    
Sbjct: 544 LDGDGFVRLGHLAPLALPGGDAAARQPWRMAASALARLGRGDEIVRRFAHRPEAGQ---- 599

Query: 577 VLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPV 636
            +A  + R       +SCGR+FDA A  LG     + YEGEAA  LEALAAS        
Sbjct: 600 -IAALLARPDTLGQTTSCGRWFDAAAGLLGLCD-EVRYEGEAAMRLEALAAS-------- 649

Query: 637 TMPRV--------DNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRG 688
             PR+           LDL     +     A     A  FH  L                
Sbjct: 650 --PRIAAEGWRISQGVLDLLPLLDRLSRLDAGAG--AGLFHGTLVAALVDWALPAIHACP 705

Query: 689 ITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAARWL 743
              +  +GG + NR L   L    A    T L P+  PA DGGL+LGQ  +A  RWL
Sbjct: 706 GARVALAGGCLINRSLAEGLITTFAARGITALLPRQSPANDGGLALGQAYLAGLRWL 762