Pairwise Alignments

Query, 750 a.a., Carbamoyltransferase HypF from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 852 a.a., (NiFe) hydrogenase maturation protein HypF (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  453 bits (1165), Expect = e-131
 Identities = 318/853 (37%), Positives = 419/853 (49%), Gaps = 134/853 (15%)

Query: 13  IRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRL---LEDPETFLVQLHQHCPPLA 69
           + G+VQGVGFRPFV+++A    L G V N   GV + +       + F   L    PPLA
Sbjct: 12  VSGQVQGVGFRPFVYRIAADHALTGTVSNTAAGVFIEVQGPAASVDGFGHDLTHKLPPLA 71

Query: 70  RIDSVEREPFIWSQLPTEFTIRQSAGGAMNTQIV--PDAATCHACLAEMNTPGERRYRYP 127
           R+ S   +    ++    F I  S  G    +++   D ATC  CLA+M+ P  RR+ YP
Sbjct: 72  RVVSCTHQDIPVAEGEDGFRIVASGDGGAGHEVLISADVATCDDCLADMSDPANRRHLYP 131

Query: 128 FINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPH 187
           F NCT+CGPR+TI R +PYDR  T MA FPLCPAC  EY +PLDRRFHAQP ACP CGP 
Sbjct: 132 FTNCTNCGPRYTITRFIPYDRDKTSMACFPLCPACAAEYENPLDRRFHAQPNACPVCGPR 191

Query: 188 LEWVS-------------------------------HGE-HAEQEAALQAAIAQLKMGNI 215
           + +V                                HG        A+QA    L  G I
Sbjct: 192 VWYVDGAPDGPAADTGYDAAPGSGRGDEPGCAPASDHGAGRPTGTPAIQALAEALAAGRI 251

Query: 216 VAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVAEGLPDAARQLLTTPAAPI 275
            A+KG+GGFHLACDA +  AV  LR RKHRP KPLA+M+P    L  A R +  +P    
Sbjct: 252 AAVKGLGGFHLACDAASDAAVGELRRRKHRPHKPLAIMVP---DLAAARRIVHVSPEEEA 308

Query: 276 VLVDKKYVPELC---DDIAPGLNEV----------------------------------- 297
           +L  ++    LC   D +A G++ V                                   
Sbjct: 309 LLAGRERPIVLCRALDGLAGGMHGVARPGDGSPLVLDPDAPRTPPPISPLISPLISPDTP 368

Query: 298 --GVMLPANPLQHLLLQ-------ELQCP-LVMTSGNLSGKPPAISNEQALADLQGIADG 347
             GVMLP  PL H+LL+       E + P LVMTSGN  G+P  + N +AL  L  IAD 
Sbjct: 369 FVGVMLPYTPLHHVLLRLYGALLPEDRVPALVMTSGNAGGEPICLGNREALRRLSSIADV 428

Query: 348 FLIHNRDIVQRMDDSVVR-----ESGEMLRRSRGYVPDALALPLGFKNVPPVLCLGADLK 402
           FL+H+RDI+ R DDSV R      + + LRR+RG+ P  + L     + P VL +G +LK
Sbjct: 429 FLLHDRDILIRTDDSVTRVNPATGAPQFLRRARGFTPRPVFLE---GDGPCVLAMGPELK 485

Query: 403 NTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQW 462
           NT C+ RG++A +SQH+GD+ +       RE    +  I   TPQ VV D HP Y+++  
Sbjct: 486 NTLCVTRGDKAFVSQHIGDMHNLETLGFHREIAAHLPRILQVTPQAVVRDLHPDYMTTAE 545

Query: 463 AREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNY 522
           A +  LP  T+ HH AH  A LAE++     G  + L LDG G G++G +WGGE L V+ 
Sbjct: 546 AEQSGLPVLTLQHHFAHIHAVLAENR---HDGPALGLALDGTGHGDDGTVWGGELLYVDN 602

Query: 523 RECQH--LGGLPAVALPGGDLAAKQPWRNLLAQCLRF-------VPEWQNYSETASVQQQ 573
               H  LG L  + LPGG+ A ++PWR  +AQ L +       V +            Q
Sbjct: 603 VALDHQRLGRLARIPLPGGEAAIREPWR--IAQGLLWHLGLHEPVTDGARPWPWLRDHAQ 660

Query: 574 NWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALE---ALAASCH 630
             ++L R +ERG+N PL SSCGR FDAV+A LG    T++YEG+AA  LE      + C 
Sbjct: 661 AAALLPRLLERGVNTPLTSSCGRLFDAVSALLGLC-TTVTYEGQAAIRLEHAQDAVSPCG 719

Query: 631 G-----VTHPVTMPR-----------VDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQ 674
           G      TH    P            +D           W     P  + A  FH  +  
Sbjct: 720 GSHDAFFTHAYPCPLRGARDGSDTLVLDTHALFRAVHDDWAR-GTPPGEVARRFHAGVVA 778

Query: 675 GFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLA--DFTLLFPQSLPAGDGGLSL 732
           G A +    A +  +  +  SGG + N  L   L   LA    T+L    LP GDG +SL
Sbjct: 779 GLADMAAAVAGVMDVPVVALSGGAMQNLTLSVHLPQALAARGLTVLTHAELPPGDGCISL 838

Query: 733 GQGVIAAARWLAG 745
           GQ    A R LAG
Sbjct: 839 GQAA-WARRELAG 850