Pairwise Alignments

Query, 298 a.a., Tyrosine recombinase XerD from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas stutzeri RCH2

 Score =  349 bits (895), Expect = e-101
 Identities = 179/290 (61%), Positives = 217/290 (74%), Gaps = 1/290 (0%)

Query: 8   IEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGY 67
           I+++LDALWLEK LA+N+  AYR DL++   WL  RG+ LA A  + +   LA RL  GY
Sbjct: 9   IDRYLDALWLEKGLADNSREAYRSDLALFNGWLSERGVRLAVAGREIILDHLAWRLNNGY 68

Query: 68  KATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLI 127
           KA S+AR LS +R  ++YL RE     DP+  +  P+L + LPK LSEA VE LL AP +
Sbjct: 69  KARSTARFLSGLRGFYRYLLREGEIAVDPTLRVDLPRLGRPLPKALSEADVEALLAAPDL 128

Query: 128 DQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVY 187
             P+ LRD+AMLEVLYA GLRV+EL+ LT+  +S+RQGV+R  GKGNKERLVPLG+EA++
Sbjct: 129 GDPIGLRDRAMLEVLYACGLRVTELISLTLEQVSMRQGVLRTFGKGNKERLVPLGDEALH 188

Query: 188 WLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLR 247
           WLE Y   GR  LL G + DVLFPS R  QMTRQTFWHRIK +A +AGI +  +SPH LR
Sbjct: 189 WLERYQREGRDELLGGKARDVLFPSLRGDQMTRQTFWHRIKLHAKVAGI-ATSISPHTLR 247

Query: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           HAFATHLLNHGADLR VQMLLGHSDLSTTQIYTH+A  RL++LH QHHPR
Sbjct: 248 HAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHAQHHPR 297