Pairwise Alignments

Query, 714 a.a., Methylmalonyl-CoA mutase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 698 a.a., Methylmalonyl-CoA mutase (NCBI) from Rhodospirillum rubrum S1H

 Score =  253 bits (647), Expect = 2e-71
 Identities = 176/608 (28%), Positives = 281/608 (46%), Gaps = 31/608 (5%)

Query: 5   QEWQQLANKELSRREKTVDSLVHQTAEGIAIKPLYTEADLDNLEVTGTLPGLPPYVRGPR 64
           + W  L +K L +       +V +T EG +I+PLYT AD  +       PG+ P+ RG  
Sbjct: 18  EAWLALVDKAL-KGAPFEKKMVTKTHEGFSIQPLYTRADWPSTGDPSGFPGVMPFTRGGT 76

Query: 65  ATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDNPRVAGD 124
           A       W +RQ         +NA    +L  G   +++ FD A   G+DSD+   A  
Sbjct: 77  AAGAVLHGWDVRQEHAHPDPAAANAQILTDLERGASSVTLRFDAAGRAGFDSDDAEAADL 136

Query: 125 VGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAVLPVLAFYIVAAEEQGVTPDKLTGT 184
            G  G+ I +++D+      + LD   V +    A  P  A        + + P    G 
Sbjct: 137 AGVEGMMIASLDDLDTALAGVFLDGAVVGLQAGAAFEPAAALLAALWARRQIAPAAALGA 196

Query: 185 IQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCSGNMPRFNTISISGYHMGEAGANCVQQ 244
              D L       +       ++  +  + A  + + P+   + + G    + GAN VQ 
Sbjct: 197 FNADPLGTLAATGSLPMSATRALSRLGALAAHTARSYPQATAVMVDGAPYHDGGANEVQT 256

Query: 245 VAFTLADGIEYIKAAISAGLKIDDFAPRLSFFFGIGMDLFMNVAMLRAARYLWSEAVSGF 304
           +A  L+ G+ Y++A  +AGL ID+ A ++ F   +  D+F+ VA LRAAR LW+  +   
Sbjct: 257 LAAVLSTGVAYLRAMEAAGLGIDEAAAQMVFSLPLDADIFLGVAKLRAARRLWARVLEAS 316

Query: 305 GAQDPKSLALRTHCQTSGWSLTEQDPYNNVIRTTIEALAATLGGTQSLHTNAFDEALGLP 364
           GA +P S A+R H  T+   LT +DP+ N++R T+   A  +GG  S+    FD ALG+ 
Sbjct: 317 GASEP-SRAMRLHATTARRVLTRRDPWVNMLRGTVSCFAGAVGGADSIAVAPFDAALGVA 375

Query: 365 TDFSARIARNTQIIIQEESELCRTVDPLAGSYYIESLTDQIVKQARAIIQQIDEAGGMAK 424
           TDFS RIARN Q+I+ EE  L R  DP  GS+Y+E+LTD++ ++A +  Q ++  GGM  
Sbjct: 376 TDFSRRIARNVQVILLEECNLGRVNDPAGGSWYVETLTDRLAREAWSAFQGLEAEGGMVA 435

Query: 425 AIEAGLPKRMIEEASAREQSLIDQGKRVIVGVNKYKLDHEDETDVLEIDNVMVRNEQIAS 484
           A+E+G     I       +  I + K  + GV+++    E       +D   +R    A+
Sbjct: 436 ALESGALAGRIAATWDDRRKAIAKRKDPLTGVSEFPNLAEAPVATAPVDLAALRQ---AA 492

Query: 485 LERIRATRDDAAVTAALNALTHAAQHNENLLAAAVNAARVRATLGEISDALEVAFDRYLV 544
             R+ A R D                     AAA+ A    ATLG ++ AL       L 
Sbjct: 493 TTRLSAARWDGVAPGD--------------FAAAIEAVGTGATLGALARAL--GDGAALR 536

Query: 545 PSQCVTGVIAQSYHQSEKSASEFDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRGAKVI 604
               V  V+A+          +F+A+   ++ +LA +G+RP+I +A +G           
Sbjct: 537 VPAVVPHVLAE----------DFEALRDASDDWLAAHGQRPKIFLANLGPVAQHTARATF 586

Query: 605 ASAYSDLG 612
           A  + + G
Sbjct: 587 AKNFFEAG 594