Pairwise Alignments

Query, 714 a.a., Methylmalonyl-CoA mutase from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 633 a.a., methylmalonyl-CoA mutase small subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  197 bits (500), Expect = 2e-54
 Identities = 134/471 (28%), Positives = 226/471 (47%), Gaps = 44/471 (9%)

Query: 3   NVQEWQQLANKELSRREKTVDSLVHQTAEGIAIKPLYTEADLDNLEVTGTLPGLPPYVRG 62
           + ++W +    +L   +     LV +T EG  +KP Y   DL+ L+ T  LPG  PY+RG
Sbjct: 16  STEQWMEKVTADLKGADFE-KKLVWKTNEGFKVKPFYRMEDLEGLKTTDALPGEFPYLRG 74

Query: 63  PRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDNPRVA 122
              T  +   W +RQ       KE+NA          K L +      ++G DS +  V 
Sbjct: 75  ---TKKSNNEWLVRQEIKVECPKEANA----------KALDIL-----NKGVDSLSFHVK 116

Query: 123 GDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSM-TMNGAVLPVLAFYIVAAEEQGVTPDKL 181
                A       E ++ L + I  + + ++  T  G V+ +    +   +++     KL
Sbjct: 117 AKELNA-------EYIETLLNGIQAECVELNFSTCQGHVVELAGLLVAYFQKKDYDVKKL 169

Query: 182 TGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCSGNMPRFNTISISGYHMGEAGANC 241
            G++  D   + L R       K  M   A  +      +P +  ++++   +  AGA  
Sbjct: 170 RGSVNYDFFNKMLTRGK----EKGDMVQTAKALIEAIQPLPFYRVLNVNAISLNNAGAYI 225

Query: 242 VQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFFFGIGMDLFMNVAMLRAARYLWSEAV 301
            Q++ + LA G EY+     AG+     A ++ F FGI  + F+ +A  RAAR LW+  V
Sbjct: 226 SQELGYALAWGNEYMNQLTDAGIPAATVAKKIKFNFGISSNYFLEIAKFRAARMLWANIV 285

Query: 302 SGFGAQ-----DPK--------SLALRTHCQTSGWSLTEQDPYNNVIRTTIEALAATLGG 348
           + +  +     D K        +  +  H +TS ++LT  D + N++RT  EA++A L G
Sbjct: 286 ASYHPECLRDCDNKGANGECRCAAKMAVHAETSTFNLTLFDAHVNLLRTQTEAMSAALAG 345

Query: 349 TQSLHTNAFDEALGLPTDFSARIARNTQIIIQEESELCRTVDPLAGSYYIESLTDQIVKQ 408
             S+    FD+    P +FS R+ARN Q++++EES   + +DP AGSYYIE+LT  I KQ
Sbjct: 346 VDSMTVVPFDKTYSTPDEFSERLARNQQLLLKEESHFDKVIDPAAGSYYIENLTVSIAKQ 405

Query: 409 ARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQSLIDQGKRVIVGVNKY 459
           A  +   ++EAGG   A++AG  +  + E++      + Q + V++G N++
Sbjct: 406 AWELFLAVEEAGGFYAALKAGTVQAAVNESNKARHKAVAQRREVLLGTNQF 456