Pairwise Alignments

Query, 326 a.a., putative protein YggR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 347 a.a., pilus retraction protein PilT from Dechlorosoma suillum PS

 Score =  292 bits (748), Expect = 7e-84
 Identities = 156/320 (48%), Positives = 213/320 (66%), Gaps = 4/320 (1%)

Query: 1   MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDA---PDVEELLREWLDDDQR 57
           M++ E++A  VK+  SDLHL +  P   R+ G +      A    DV  ++ + ++D QR
Sbjct: 1   MDITELLAFGVKNKASDLHLSAGLPPMIRVHGDVRRINLPAMEHKDVHAMVYDIMNDGQR 60

Query: 58  AILLENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLK 117
               EN + DF+  +    R R +AF Q +G     R +PS    LE L AP +  E+ +
Sbjct: 61  KTYEENLECDFSFEVPNLARFRVNAFVQHRGAGAVFRTIPSKVLSLEDLNAPKIFKEISE 120

Query: 118 SENGMILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177
              G++LVTG TGSGKSTTLAAMV ++N++   HILT+EDP+E+++ +++CLI QRE+G 
Sbjct: 121 FPRGIVLVTGPTGSGKSTTLAAMVNHINENDYGHILTVEDPIEFVHEAKKCLINQREVGP 180

Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237
           H ++F + LR+ALREDPDVIL+GE+RD ETIRLA+TAAETGHLV  TLHT  AA+ V+R+
Sbjct: 181 HTLSFNNALRSALREDPDVILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTVDRI 240

Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTH 296
           +D FPA EK+ +R  L+ SLRAV+SQ L   K   GRVA  E++I TPA+ NLIRE K  
Sbjct: 241 IDVFPAAEKEMIRAMLSESLRAVISQTLLKTKDGNGRVAAHEIMIGTPAIRNLIREAKIA 300

Query: 297 QLPHVIQTGQQVGMITFQQS 316
           Q+   IQTGQQ GM T  Q+
Sbjct: 301 QMYSAIQTGQQFGMQTLDQN 320