Pairwise Alignments

Query, 207 a.a., Transcriptional regulator YqjI from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 152 a.a., PadR family transcriptional regulator from Methanococcus maripaludis JJ

 Score = 54.7 bits (130), Expect = 9e-13
 Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 12/143 (8%)

Query: 63  LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI-REEEGG 121
           ++++IL  L +++ HGY LI  I+ +T    + SP ++YP L  L+   LI + + E+ G
Sbjct: 11  IKILILKFLEKENLHGYLLISNIKEIT--GISVSPSMVYPILSNLKTAGLIEVEKTEDRG 68

Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALD-NFKAVLDLRVN 180
           KK   LT +G  +L+ N+ ++E   ++ +A           ++K+AL   F+  +D+   
Sbjct: 69  KKIYKLTNEGHSFLDRNQSKIEYCMKKSEALYYFHNF-GGIELKKALHLAFEEFIDM--- 124

Query: 181 QSDISDAQIKKIIAVIDRAAFDI 203
                D + KKI  ++ + A DI
Sbjct: 125 ----DDEKRKKIGEIMQKCAKDI 143