Pairwise Alignments

Query, 443 a.a., putative serine transporter from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 423 a.a., aromatic amino acid permease (RefSeq) from Shewanella loihica PV-4

 Score =  144 bits (363), Expect = 5e-39
 Identities = 104/403 (25%), Positives = 194/403 (48%), Gaps = 16/403 (3%)

Query: 36  TDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESP- 94
           +DT W++   G A+GAGI+FLP+  G+ G W  +L +VI  P  YL  R     +  S  
Sbjct: 21  SDTTWMLSLFGTAVGAGILFLPINAGMGGFWPLVLMAVIIGPMTYLAHRGLSRFVCSSQR 80

Query: 95  ECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSD 154
           +  D   V+  Y G   G  +  LYF  +   + +Y   ITN   S++    V +  ++ 
Sbjct: 81  QGSDITHVVEEYFGVGAGKAITLLYFFAIYPIVLIYGVGITNTVDSFI----VNQLGMAS 136

Query: 155 SPFYGL--VLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLP 212
            P + L  +L+  ++++   GEK + K++  +V   + ++A + + ++  W +  +  +P
Sbjct: 137 PPRFLLSGILVLGMMSVMVSGEKFMLKVTQLLVYPLVGILAFMSLYLIPSWKMDALMEVP 196

Query: 213 PLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFV 272
             G  +    +T+P  + +      +S   +S + +  S    +   +        + FV
Sbjct: 197 AAGEFLGTVWLTIPVLVFAFNHSPAISQFSVSLKKQYGSNAAKKADVILRNTSMMLVGFV 256

Query: 273 TVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNNFAVMTAF 332
            +F +  S  L++   +  +A  QN+  L+  A       + +V     I+   A++++F
Sbjct: 257 MLFVF--SCVLSLSPAQLAEAKAQNLPILSYLANV---HASGFVSYFGPIIAVIAIVSSF 311

Query: 333 FGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLS-FT 391
           FG YLG  E  +GI+   LR     +++++  + + I+ F  L  W   V+N  +L    
Sbjct: 312 FGHYLGATEGLKGIITKQLRSS--NKEVSDAKIDKFILGFMFLTIWGVAVINPSILGMIE 369

Query: 392 SICSPIFGMVGCLIPAWLVYKVPALHKYKG-MSLYLIIVTGLL 433
           ++  PI   +  L+P + VYKVPAL  Y+G +S  L+I+ GLL
Sbjct: 370 ALGGPIIAAILYLMPMYAVYKVPALKAYRGRISNILVILAGLL 412