Pairwise Alignments

Query, 294 a.a., Lipoprotein NlpI from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 57  TDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 116
           T D RA   + RG++Y +    A A  DFS+A+++ P  PE +N  GI     G+ D A+
Sbjct: 177 TADPRAY--HNRGLIYQARNQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNAF 234

Query: 117 EAFDSVLELDPTYNYAHLNRGIALYY---GGRDKLAQDDLLAFYQDDPNDPFRS 167
             F++ + L+     +  N+  AL Y   G + K A+    A   D   +P R+
Sbjct: 235 SDFNTAINLNGKLAESWANQ--ALIYERRGDKAKAAKSYSHALSLDPKYEPARA 286



 Score = 43.1 bits (100), Expect = 7e-09
 Identities = 25/77 (32%), Positives = 36/77 (46%)

Query: 86  SQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR 145
           S  +A  P  PE +N  G    +AG F  A   FD  ++L+P +  A+ NR +     G 
Sbjct: 68  SSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQRNLGN 127

Query: 146 DKLAQDDLLAFYQDDPN 162
            + A  D  A  Q +PN
Sbjct: 128 QQAALADYNAALQINPN 144



 Score = 43.1 bits (100), Expect = 7e-09
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 10/105 (9%)

Query: 54  RALTDDERA--------QLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIY 105
           RA+ D ++A        Q    R ++  +LG +  A  D++ AL I P+    +   G  
Sbjct: 96  RAVADFDQAIQLNPRFYQAYANRALVQRNLGNQQAALADYNAALQINPNYDVAYIGRGNL 155

Query: 106 LTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQ 150
             QA   DAA+  F+  +ELD     A+ NRG  L Y  R++ AQ
Sbjct: 156 YRQANQLDAAFNDFNKAIELDTADPRAYHNRG--LIYQARNQHAQ 198



 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 8/155 (5%)

Query: 10  VATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERG 69
           + +AL +AGC      K E +   ++     E  +A +  ++AS   +D E   +   RG
Sbjct: 34  LGSALLIAGCQTD---KPESM-FRVERAQGSEENIASLSSVIASNP-SDPEGYNV---RG 85

Query: 70  VLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY 129
             Y   G    A  DF QA+ + P   + +    +     GN  AA   +++ L+++P Y
Sbjct: 86  SAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQRNLGNQQAALADYNAALQINPNY 145

Query: 130 NYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 164
           + A++ RG       +   A +D     + D  DP
Sbjct: 146 DVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADP 180



 Score = 33.9 bits (76), Expect = 5e-06
 Identities = 23/85 (27%), Positives = 34/85 (40%)

Query: 68  RGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDP 127
           RG LY        A NDF++A+ +    P  ++  G+          A E F   + L P
Sbjct: 152 RGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNRGLIYQARNQHAQAIEDFSKAISLSP 211

Query: 128 TYNYAHLNRGIALYYGGRDKLAQDD 152
           +    +  RGI+    G D  A  D
Sbjct: 212 SSPEPYNGRGISYVAQGDDDNAFSD 236