Pairwise Alignments

Query, 294 a.a., Lipoprotein NlpI from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 595 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 48/182 (26%), Positives = 70/182 (38%), Gaps = 9/182 (4%)

Query: 86  SQALAIRPDMPEVFNYLGIY---LTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY 142
           ++AL+    +P     LG     L + G  D A    D  L   P     H  +G+ L  
Sbjct: 96  AEALSAAEGLPATAGALGFRADRLEELGRRDQAIALLDDALRRHPDEAELHRRQGVLLRR 155

Query: 143 GGRDKLAQDDLLAFYQDDPNDP--FRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGW 200
            GR   A     A     P D   + SL   L E  LDE+  K + +     +D+  W +
Sbjct: 156 AGRAAQAIAPWRALVALRPGDAAAWSSLGAGLGESGLDEEAEKALRRAVALAADEPDWTY 215

Query: 201 NIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLA 260
           N+  F +     +  +  L A        A +   TN  LG   L LGD+  A A  + A
Sbjct: 216 NLAHFLIERDRLEDALPLLDAAVARAPERAHY--HTN--LGVCRLGLGDIKGAIAAHRQA 271

Query: 261 VA 262
           +A
Sbjct: 272 LA 273



 Score = 31.6 bits (70), Expect = 5e-05
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 14/101 (13%)

Query: 44  LARMEQILASRALTDD------ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE 97
           L R +Q +A   L DD      + A+L   +GVL    G  A A   +   +A+RP    
Sbjct: 122 LGRRDQAIA---LLDDALRRHPDEAELHRRQGVLLRRAGRAAQAIAPWRALVALRPGDAA 178

Query: 98  VFNYLGIYLTQAGNFDAAYEAFDSVLEL-----DPTYNYAH 133
            ++ LG  L ++G  + A +A    + L     D TYN AH
Sbjct: 179 AWSSLGAGLGESGLDEEAEKALRRAVALAADEPDWTYNLAH 219



 Score = 27.7 bits (60), Expect = 7e-04
 Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 3/100 (3%)

Query: 76  GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLN 135
           GL   A     +A+A+  D P+    L  +L +    + A    D+ +   P   + H N
Sbjct: 191 GLDEEAEKALRRAVALAADEPDWTYNLAHFLIERDRLEDALPLLDAAVARAPERAHYHTN 250

Query: 136 RGIALYYGGRDK---LAQDDLLAFYQDDPNDPFRSLWLYL 172
            G+     G  K    A    LA   D+P   +   W  L
Sbjct: 251 LGVCRLGLGDIKGAIAAHRQALALDPDEPEARYDLAWALL 290



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 62  AQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDS 121
           A  L ER  L D+L L          A+A  P+       LG+     G+   A  A   
Sbjct: 218 AHFLIERDRLEDALPL-------LDAAVARAPERAHYHTNLGVCRLGLGDIKGAIAAHRQ 270

Query: 122 VLELDPTYNYAHLNRGIALYYGG 144
            L LDP    A  +   AL   G
Sbjct: 271 ALALDPDEPEARYDLAWALLLAG 293



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)

Query: 67  ERGVLYDSLGLRALARNDFS-------QALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAF 119
           ER   + +LG+  L   D         QALA+ PD PE    L   L  AG ++  + A 
Sbjct: 243 ERAHYHTNLGVCRLGLGDIKGAIAAHRQALALDPDEPEARYDLAWALLLAGAWEEGWAAH 302

Query: 120 DS 121
           ++
Sbjct: 303 EA 304