Pairwise Alignments

Query, 325 a.a., Inner membrane protein YrbG from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 325 a.a., Na+/Ca+ antiporter, CaCA family from Marinobacter adhaerens HP15

 Score =  223 bits (567), Expect = 6e-63
 Identities = 125/300 (41%), Positives = 191/300 (63%), Gaps = 15/300 (5%)

Query: 3   LATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVVSIGTSLPEVIVSLAASL 62
           +A   +I GL+L+V+SAD+ V  A+   +  G+P L+IGM ++  GTS PE+ VS  A+ 
Sbjct: 1   MAFGAIIAGLILLVWSADKFVEGAAATAKHLGMPTLLIGMVIIGFGTSAPELAVSAMAAS 60

Query: 63  HEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLRRELPLMLLVSVVAGSVLYDG 122
                LA+G   GSNI NI LI+GL A++ P  VHS V+R+ELPL+++++++AG+ L DG
Sbjct: 61  DGNPGLALGNGYGSNITNIALIVGLTAIIAPIAVHSQVIRKELPLLIVLTLIAGAQLIDG 120

Query: 123 QLSRSDGIFLL--FLAVL-WLLFIVKLARQAERQGTDSLTREQLAE-LPRDGGLPVAFLW 178
           QLSR DG  LL  F  V+ W ++      Q  +   D L  +  AE +     L  A +W
Sbjct: 121 QLSRMDGWVLLAVFAVVMGWSIY------QGLKGKADPLAGDADAEIIAHPMPLKTAVIW 174

Query: 179 LGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAIGTSLPELATAIAGVRKGEND 238
           L I L+++ V++RM+V  A  +A    +S+L +GLT +AIGTSLPELA+A+A V+K E+D
Sbjct: 175 LVIGLVLLIVSSRMLVWGAVTIAQSLGVSDLVIGLTIVAIGTSLPELASALAAVKKNEHD 234

Query: 239 IAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDYSVMLLVSI-----IFALLCWRR 293
           + +GNI+G+ IFN + V+GL A+I P  +DP    RD+++ML +++      + L  WR+
Sbjct: 235 LILGNILGSGIFNTLAVVGLAAVIEPLAVDPEVLYRDWTLMLALTVGLFLMGYGLTGWRK 294