Pairwise Alignments

Query, 309 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 372 a.a., conserved hypothetical radical SAM protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  197 bits (500), Expect = 4e-55
 Identities = 107/270 (39%), Positives = 151/270 (55%), Gaps = 6/270 (2%)

Query: 14  LTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNV-ASFADEAQQHRSIAEQLAHQAN 72
           L  R+G +V K+ L  GFSCPNRDGT+ RGGC FCN   S +   +   ++ EQ      
Sbjct: 15  LRLRFGARVQKVPLDAGFSCPNRDGTLSRGGCVFCNPRGSGSGLGEDGLTLEEQWTVWTG 74

Query: 73  LVNRAKR---YLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDL 129
              R +    ++AY Q++++T+  +  LR +         IVG  VGTRPDCV +  LDL
Sbjct: 75  RYARTRNAGLFIAYLQSFSNTYGPIDKLRHVLGVLPVLPGIVGAAVGTRPDCVDNERLDL 134

Query: 130 LCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLP 189
           +        EVWLELGLQ+AHD TL RINRGHD A  +R  + A  RGL+VC+HLI GLP
Sbjct: 135 VAALPLP--EVWLELGLQSAHDATLARINRGHDAAASKRAVREAAARGLRVCAHLIAGLP 192

Query: 190 GEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMI 249
           GE   + L +++ V    V G+K H L++ + + +A+ W AG    +E EDY       +
Sbjct: 193 GESGDDFLASVDWVNRLPVHGVKFHGLYVCEHTALARQWRAGNYTPLEREDYADLIARAL 252

Query: 250 RHTPPEVIYHRISASARRPTLLAPLWCENR 279
               PE++  R++       LLAP W  ++
Sbjct: 253 PRLRPEIVIQRLTGDPAGDELLAPDWANDK 282