Pairwise Alignments

Query, 455 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 471 a.a., periplasmic serine protease, Do/DeqQ family from Pseudomonas stutzeri RCH2

 Score =  270 bits (689), Expect = 1e-76
 Identities = 168/467 (35%), Positives = 266/467 (56%), Gaps = 40/467 (8%)

Query: 22  SFQAVASIPGQVA-DQAPLPSLAPMLEKVLPAVVSVRVE------GTASQGQKI---PEE 71
           +F A  ++ GQ    QA LP   P++E   PAVV++  +      G  +Q  ++   P  
Sbjct: 9   AFVAGLALLGQATLAQADLPDFTPLVESASPAVVNISTKQKVPARGATAQMPELEGLPPI 68

Query: 72  FKKFFGDDLPDQPAQPFEG-------LGSGVIINASKGYVLTNNHVINQAQKISIQLNDG 124
           F++FF   +P  P  P  G       LGSG II+   GYVLTNNHV+  A +I ++L D 
Sbjct: 69  FREFFEHSIPQMPGAPGRGQQREAQSLGSGFIIS-DDGYVLTNNHVVAGADEIIVRLPDR 127

Query: 125 REFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSG 184
            E +AKLIG+D +SD+A+L+++    L  + I  SD+L+ G++ +A+G+PFG   T T+G
Sbjct: 128 SELEAKLIGADPRSDVAVLKVEGKG-LPTVKIGRSDELKAGEWVLAIGSPFGFDHTVTAG 186

Query: 185 IVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGF 244
           IVSA GRS  N E    FIQTD +IN GNSGG L NL GE++GIN+ I    GG +G+ F
Sbjct: 187 IVSATGRSLPN-ESYVPFIQTDVAINPGNSGGPLFNLKGEVVGINSQIFTRSGGFMGLSF 245

Query: 245 AIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSA 304
           AIP ++A  +A QL   G++ RG LG+   E++ D+A++F L+   GA V++V+ G  +A
Sbjct: 246 AIPIDVAMDVANQLRTDGKVNRGWLGVVIQEVNKDLAESFGLERPAGALVAQVMDGGPAA 305

Query: 305 KAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSS 364
           ++G++ GD+I SLNGKP+   A+L   +   +PG+K ++ ++R+G    ++V++    + 
Sbjct: 306 RSGLRVGDVILSLNGKPIVMSADLPHLVGALKPGSKARMEVVRDGDRKMLDVSIG---AM 362

Query: 365 SASAEMITPALEGATLSDGQL--------------KDGGKGIKIDEVVKGSPAAQAGLQK 410
               E +  +  G   SD +L               D   G+ I E++ G PAA  GL+ 
Sbjct: 363 PEEGEPVAASGGGQERSDNRLGVKVTELTEEQKKSLDLPGGVVITEILNG-PAAMIGLRP 421

Query: 411 DDVIIGVNRDRVNSIAEMRKVLAAKP--AIIALQIVRGNESIYLLMR 455
            DVI  +N   +NS A   +V    P    ++++++R   + ++  +
Sbjct: 422 GDVITHLNNQAINSAATFGRVAEQLPKNRSVSMRVLRQGRASFITFK 468