Pairwise Alignments

Query, 425 a.a., hypothetical protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  322 bits (825), Expect = 1e-92
 Identities = 164/314 (52%), Positives = 218/314 (69%), Gaps = 20/314 (6%)

Query: 93  LVALLVLAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYT 152
           L+A+LV+    P +VS    +I    ++Y++LGLGLN+VVGLSG LVLGY  FYA+GAY 
Sbjct: 93  LLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAYA 152

Query: 153 FALLNHYYGLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNN 212
           +ALLN  +GLGFWT LPI G +AA  G LLGFPVLRL+GDYLAIVTLGFGEIVR++L N 
Sbjct: 153 YALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLENW 212

Query: 213 TEITGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLV 272
             +T GP+GIS+I +P  FG+E S                     S+   ++Y + L  V
Sbjct: 213 GSVTRGPSGISKIARPGLFGMELS--------------------VSEATTYIYYLILAAV 252

Query: 273 VLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAA 332
           + ++F + RL    +GRAW+ALREDEIAC ++G+     KLTAF + A +AGFAG +FAA
Sbjct: 253 IFTIFAVGRLKDSRIGRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAA 312

Query: 333 RQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG 392
           +  F++P SFTF ESA +LA+VVLGGMGS   V+L A++L++  E +R F+EY ML+ G 
Sbjct: 313 KTTFINPASFTFLESAMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEYRMLIFGA 372

Query: 393 LMVLMMIWRPQGLL 406
            MVLMM++RPQGL+
Sbjct: 373 AMVLMMVFRPQGLV 386