Pairwise Alignments

Query, 680 a.a., Oligopeptidase A from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 720 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella loihica PV-4

 Score =  393 bits (1009), Expect = e-113
 Identities = 239/677 (35%), Positives = 374/677 (55%), Gaps = 27/677 (3%)

Query: 9   FELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVDDVLGRIFS 68
           ++ P F KI  +   PA T+ + +  + ++ ++   A   ++N    + +   +L R+  
Sbjct: 62  YQAPEFDKITFDDYAPAFTQGIIEHDKEIQAIIDNQAAADFDNTIVAMEKSGSLLTRVAK 121

Query: 69  PVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYATLNTAQKK 128
              +L SV ++ +++    +  P LS +   +  +  L+     +       +L+   K 
Sbjct: 122 TFFNLASVNSNSQVQTLEAELAPKLSAHWDNIFLNPELFARVESVYKSRD--SLSAEDKH 179

Query: 129 AVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLVTDEAELA 188
            V+     FE +G  L    +++  ++  +L+ L  ++S NVLD+      +V D+AEL 
Sbjct: 180 LVEYYYLAFERAGAKLSDADKEKMRDLNGQLASLTTEFSKNVLDSFKNEVIIVKDKAELD 239

Query: 189 GMPESALAAAKAQAEAKELEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRASD-QG 247
           G+ ++ +A     A+    EGYL+TL   +  P+++  +N+ LRE++++  + RA    G
Sbjct: 240 GLSDAEIATLAQAAKDAGKEGYLITLVNTTRQPILSSLNNRELREKVWKTSANRAMALNG 299

Query: 248 PNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLDFLTDLAKRARP 307
           PN  K  +         L  E A LLG++++A  ++A +MA+ P  V + L DLA +A  
Sbjct: 300 PNIVKQSH---------LHAEKAALLGYDSWAAYTVADQMAKTPTAVYEILDDLAPKAVA 350

Query: 308 QGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPENKAVN-GL 366
           + + E A ++A  KA     EL PWD AYYSEK ++  Y +   Q+ PYF  N+ +N GL
Sbjct: 351 KAKLEAADIQAQIKASGQDFELAPWDWAYYSEKVRKAKYDLDQSQVTPYFEFNRVLNDGL 410

Query: 367 FEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGGAWMDDC 426
           F  ++++YGIT K RKD+ VW+PDV  +E+++++    G FYLD YARE K GGAWMD+ 
Sbjct: 411 FFAMEKLYGITVKPRKDLPVWNPDVLAYEIFNKDKSSIGIFYLDPYAREGKNGGAWMDEF 470

Query: 427 VGQMRKADGSL-QKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETA 485
           V Q     G L  KPV Y   N  +P +G P L T+DEV T+FHEFGH +H + ++++  
Sbjct: 471 VTQ----SGLLGTKPVVYNALNIPKPASG-PTLMTYDEVSTMFHEFGHAVHGLFSQVKYP 525

Query: 486 GVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAA 545
            V+G +  P D VE PSQ  E+W  +PE LA  + HY+TGEP+P ELL K+LAA  +   
Sbjct: 526 SVAG-TATPRDFVEFPSQANEDWSIDPEVLANYAKHYQTGEPIPAELLKKVLAASKFGQG 584

Query: 546 LFILRQLEFGLFDFRLHA---EFRPDQGAKILETLAEIKKLVAVVPSPSWGRFPHA-FSH 601
                 L   + D   H+   + + D  AK  E  A  K  +   P P   R+  A FSH
Sbjct: 585 FDTTEYLAAAILDMEWHSIGVDAKIDDVAKF-EQQALAKHGIDFAPIPP--RYKSAYFSH 641

Query: 602 IFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKR 661
            FAGGY+AGYY+YLW +V AADAF      G  + E G  F DN+LS+G SE+ M  + +
Sbjct: 642 AFAGGYSAGYYAYLWTEVFAADAFDFMSHNGGLSLENGNKFRDNVLSKGNSEDLMQDYIK 701

Query: 662 FRGREPQLDAMLEHYGI 678
           F GR+P +DA+L+H G+
Sbjct: 702 FTGRKPTVDALLKHRGL 718