Pairwise Alignments

Query, 680 a.a., Oligopeptidase A from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 726 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella loihica PV-4

 Score =  425 bits (1093), Expect = e-123
 Identities = 238/686 (34%), Positives = 383/686 (55%), Gaps = 20/686 (2%)

Query: 2   TNPLLTPFE----LPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLA 57
           +NP   P++    +P F KI PEH +PA    +   +  ++ ++   A  T+ N  + + 
Sbjct: 49  SNPFFKPYDTFLGMPDFDKIKPEHYLPAFKAGIAQHKAEIQAIIDNPAAPTFANTIEAME 108

Query: 58  EVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGD 117
              D+  ++ S   +L S   + +L+   ++  P+LS     +  ++ L+K  + + D  
Sbjct: 109 FAGDLTTKVASVFYNLTSADTNEQLQAISKEVSPMLSAAGDDILLNDQLFKRVKAVYDQR 168

Query: 118 HYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGW 177
               LNTAQ+K +++  + F   G  L    + +   +  ++ +L  ++ +N+L  T  +
Sbjct: 169 DSLALNTAQQKLLEDTYKSFTRGGANLSDADKVKLRALNEKIGKLSLEFGDNLLAETNAF 228

Query: 178 TKLVTDEAELAGMPESALAAAKAQAEAKELEG-YLLTLDIPSYLPVMTYCDNQALREEMY 236
             ++ + A+L G+P+  +  A   AE K   G ++ T   PS  P +TY DN+ LRE++Y
Sbjct: 229 ELVIDNAADLKGLPQDVINTAAQTAEKKGHPGKWVFTTQRPSITPFLTYADNRELREKIY 288

Query: 237 RAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLD 296
           + Y  R    G N    DN K++ ++ ALR E AQL+G++++A   L  + A+ P+ V  
Sbjct: 289 KGYVER----GNNNNAHDNKKILAQMAALRAERAQLMGYKSHAHFVLEERTAKTPENVYG 344

Query: 297 FLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPY 356
            L  +   A  Q + E+A ++    AE G  +L  WD  YY++K +   YS ++++ RPY
Sbjct: 345 LLDKVWPAALGQAKAEVAVMQELIDAEGGNFKLAAWDWWYYADKIRVAKYSFNEQETRPY 404

Query: 357 FPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYAREN 416
           F     + G+F    R+YGIT KER D+  ++ +VR +E+YD++  L   F  D Y R++
Sbjct: 405 FSLENTLKGVFYTANRLYGITVKERTDLPKYNDEVRTWEVYDKDGSLMAIFLGDYYVRDS 464

Query: 417 KRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLH 476
           KRGGAW +    Q R   G   KP+     N+ RPV  +PAL T DE  TLFHEFGH LH
Sbjct: 465 KRGGAWANAYRKQYR-MHGVESKPIIVNVLNYPRPVGDEPALLTFDEASTLFHEFGHALH 523

Query: 477 HMLTRIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKM 536
            ML+ +E    +G S VP D VE PSQ MENW  +PE LA  + HY+TGE +P+ L++K+
Sbjct: 524 AMLSDVEYRSQAGTS-VPRDYVEFPSQVMENWMTQPEVLAQFAKHYKTGEVIPQSLVEKI 582

Query: 537 LAAKNYQAALFILRQLEFGLFDFRLH--AEFRPDQGAKI-LETLAEIKKLVAVVPSPSWG 593
            AA  +      +  +     D   H  ++F P   AK   ++L+++  +  + P     
Sbjct: 583 QAASKFNQGFATVEYMAATKLDLDWHTLSDFEPKDAAKFEADSLSKMGLIEEIAP----- 637

Query: 594 RFPHA-FSHIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGS 652
           R+    FSHIF+GGY+AGYYSYLW+D+L ADAF  F+E GIF++ T  +F +N+LS+GGS
Sbjct: 638 RYRSTYFSHIFSGGYSAGYYSYLWSDILGADAFEAFKENGIFDKATADAFRNNVLSQGGS 697

Query: 653 EEPMDLFKRFRGREPQLDAMLEHYGI 678
           E+PM L+K+FRG+E  ++ +L   G+
Sbjct: 698 EDPMLLYKQFRGKEAGIEPLLRSRGL 723