Pairwise Alignments

Query, 300 a.a., Dipeptide transport system permease protein DppC from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 302 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  388 bits (997), Expect = e-113
 Identities = 192/301 (63%), Positives = 233/301 (77%), Gaps = 1/301 (0%)

Query: 1   MSQVTENKVISA-PVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAE 59
           M++ T    IS  P     L EFW+YF  N+GAV+GL + + ++ +AIFA  +AP+NP  
Sbjct: 1   MTEATATTAISTDPTRRARLAEFWYYFSENRGAVIGLFFFLFLVLLAIFAPLVAPHNPTI 60

Query: 60  QFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVIL 119
           QFR+A+L PP WQEGG    LLGTD VGRD+LSRL+YG R SL VG +V VLSL  G+++
Sbjct: 61  QFREAVLLPPVWQEGGRATFLLGTDAVGRDMLSRLIYGTRFSLFVGVIVTVLSLTGGILV 120

Query: 120 GLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRL 179
           G+IAGYF G +D +IMRV+DI+LA PSLLLALVLVA+ GP + NA +A+  V  PH+VRL
Sbjct: 121 GVIAGYFRGWIDTVIMRVMDIILAFPSLLLALVLVAVLGPGLTNAMIAIALVFQPHFVRL 180

Query: 180 TRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGF 239
           TRAAV+ E  RDYV A++VAGAG  R MF  I PNC+APLIVQA+L FS+AILD AALGF
Sbjct: 181 TRAAVMTEKTRDYVVAAKVAGAGHARLMFKTILPNCMAPLIVQATLSFSSAILDAAALGF 240

Query: 240 LGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLK 299
           LGMGAQPPTPEWGTML++  +F   AWWVVT PGLAIL+TVLA NLMGDGLRDALDPKLK
Sbjct: 241 LGMGAQPPTPEWGTMLAEAREFILRAWWVVTLPGLAILVTVLAINLMGDGLRDALDPKLK 300

Query: 300 Q 300
           +
Sbjct: 301 R 301