Pairwise Alignments

Query, 323 a.a., Lipopolysaccharide heptosyltransferase 1 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 350 a.a., glycosyl transferase family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 18/297 (6%)

Query: 5   IVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRK 64
           +++ S++GDV H +  +   Q+  P +   WV+ +   Q+      +E VI      + K
Sbjct: 13  LLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIEFVI------FDK 66

Query: 65  AWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGLDWQTAREPLA 124
              S   KA  +  R AL+  ++D ++  Q  +++      +   V+ G D   A+E   
Sbjct: 67  ---SQGFKAYGQLCR-ALKGRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEG-Q 121

Query: 125 SLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIA---QHFLTNLPTDAGEYA 181
            L  N +       H +E     FA+ LG ++     D  I    + F   L  D  +  
Sbjct: 122 WLVTNERVEAMATPHVLEGFMG-FARKLGVTELPPSWDMHIPAADEVFAKELVADGEKVL 180

Query: 182 VFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFA---YVEV 238
               A ++ +++W  E +  +       G R+ L  G    E+      E         +
Sbjct: 181 AICAAASKAERNWLPERYAAVADYAVSKGYRVLLCGGPAQLEKDLAAAIEANCSSKLTNL 240

Query: 239 LPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQM 295
           + K SL  +  +L     V++ DTG +H+      P I +Y  ++PG  G Y   ++
Sbjct: 241 VGKTSLIQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSREL 297